RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 GALNT5Q7Z7M9 940 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 CYP4Z1Q86W10 505 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 MICU2Q8IYU8 434 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 RBFAQ8N0V3 343 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 CADM3Q8N126 398 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ZCCHC7Q8N3Z6 543 aaKnown RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 LIX1Q8N485 282 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 CLHC1Q8NHS4 586 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 HCAR2Q8TDS4 363 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 GUCD1Q96NT3 240 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ZBTB18Q99592 522 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 RHNO1Q9BSD3 238 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 DPY30Q9C005 99 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 WDR12Q9GZL7 423 aaKnown RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 CLPBQ9H078 707 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 RSPH9Q9H1X1 276 aaPredicted RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 TRIT1Q9H3H1 467 aaKnown RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 CLMPQ9H6B4 373 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 PRDM6Q9NQX0 595 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ATAD3AQ9NVI7 634 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 C2orf42Q9NWW7 574 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 VNN3Q9NY84 501 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ZDHHC3Q9NYG2 299 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 ERVK-18Q9QC07 812 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 GULP1Q9UBP9 304 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 EIF3LQ9Y262 564 aaKnown RBP8.31□□□□□ -1.08
TRIM55-204ENST00000353317 PCDHB14Q9Y5E9 798 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 COMMD10Q9Y6G5 202 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 PMF1-BGLAPU3KQ54 211 aa8.31□□□□□ -1.08
TRIM55-204ENST00000353317 TRBV5-3A0A0A0MS03 114 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 A0A1W2PP55 124 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 A0A1W2PQ67 120 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 OR2AG2A6NM03 316 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 M0QX08 132 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 PFDN6O15212 129 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 IL6P05231 212 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 ZNF7P17097 686 aaPredicted RBP8.3□□□□□ -1.08
TRIM55-204ENST00000353317 XPAP23025 273 aaPredicted RBP8.3□□□□□ -1.08
TRIM55-204ENST00000353317 FMO3P31513 532 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 MAP2K4P45985 399 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 VBP1P61758 197 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 PHC1P78364 1004 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 DNASE1L3Q13609 305 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 FGL2Q14314 439 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 CST6Q15828 149 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 ZXDCQ2QGD7 858 aaPredicted RBP8.3□□□□□ -1.08
TRIM55-204ENST00000353317 TMEM31Q5JXX7 168 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 PTRHD1Q6GMV3 140 aaKnown RBP8.3□□□□□ -1.08
TRIM55-204ENST00000353317 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.3□□□□□ -1.08
TRIM55-204ENST00000353317 MACC1Q6ZN28 852 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 ADAMTSL2Q86TH1 951 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 MCOLN3Q8TDD5 553 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 CSGALNACT1Q8TDX6 532 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 FOXJ1Q92949 421 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 ZNF566Q969W8 418 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 DTD2Q96FN9 168 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 PDLIM5Q96HC4 596 aaKnown RBP8.3□□□□□ -1.08
TRIM55-204ENST00000353317 OR52E6Q96RD3 313 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 DMDP11532 3685 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 M0R3G1 203 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 SLC22A1O15245 554 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 RGS14O43566 566 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 B3GALT4O96024 378 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 BMP4P12644 408 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 CYP4B1P13584 511 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 TGM1P22735 817 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 TNFRSF4P43489 277 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 GZMMP51124 257 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 PTPN5P54829 565 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 SLC35A2P78381 396 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 SIM2Q14190 667 aaPredicted RBP8.3□□□□□ -1.08
TRIM55-204ENST00000353317 PHKG1Q16816 387 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 SGO1Q5FBB7 561 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 PAGE2BQ5JRK9 111 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 CPZQ66K79 652 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 TMEM92Q6UXU6 159 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 FKBP9P1Q75LS8 142 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 B3GNT8Q7Z7M8 397 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 RGL4Q8IZJ4 473 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 MFSD4AQ8N468 514 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 RASGEF1AQ8N9B8 481 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 RORBQ92753 470 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 KLK6Q92876 244 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 GLMNQ92990 594 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 AP2M1Q96CW1 435 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 COPS8Q99627 209 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 SH3GL1Q99961 368 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 MAGIXQ9H6Y5 334 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 KLQ9UEF7 1012 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 ZFR2Q9UPR6 939 aaKnown RBP8.3□□□□□ -1.08
TRIM55-204ENST00000353317 PCDHGA10Q9Y5H3 936 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 WDFY4Q6ZS81 3184 aa8.3□□□□□ -1.08
TRIM55-204ENST00000353317 SDK1Q7Z5N4 2213 aa8.29□□□□□ -1.08
TRIM55-204ENST00000353317 TMEM265A0A087WTH1 108 aa8.29□□□□□ -1.08
TRIM55-204ENST00000353317 IGLON5A6NGN9 336 aa8.29□□□□□ -1.08
TRIM55-204ENST00000353317 WNT9AO14904 365 aa8.29□□□□□ -1.08
TRIM55-204ENST00000353317 RAD51BO15315 384 aa8.29□□□□□ -1.08
TRIM55-204ENST00000353317 ULK1O75385 1050 aa8.29□□□□□ -1.08
TRIM55-204ENST00000353317 SEC22BO75396 215 aa8.29□□□□□ -1.08
TRIM55-204ENST00000353317 NADKO95544 446 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms