RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 RNF130Q86XS8 419 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 CACTIN-AS1Q8N1I8 211 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 OR2A12Q8NGT7 310 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 DNAJA3Q96EY1 480 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 TBL1XR1Q9BZK7 514 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 HDHD2Q9H0R4 259 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 PNPLA3Q9NST1 481 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 ATXN10Q9UBB4 475 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 KLK3P07288 261 aaPredicted RBP13.24□□□□□ -0.29
SMC6-201ENST00000351948 ETS2P15036 469 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 IL1RNP18510 177 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 AQP4P55087 323 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 CLEC12AQ5QGZ9 265 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 PTCRAQ6ISU1 281 aaPredicted RBP13.24□□□□□ -0.29
SMC6-201ENST00000351948 OR7A2PQ8NGA2 310 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 GIPC3Q8TF64 312 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 SLC25A36Q96CQ1 311 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 MACROD1Q9BQ69 325 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 SMPD3Q9NY59 655 aaPredicted RBP13.24□□□□□ -0.29
SMC6-201ENST00000351948 DOCK2Q92608 1830 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 P2RY2P41231 377 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.24□□□□□ -0.291e-6■□□□□ 8.8
SMC6-201ENST00000351948 TOP3AQ13472 1001 aaPredicted RBP13.24□□□□□ -0.29
SMC6-201ENST00000351948 DEFB133Q30KQ1 61 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 FAM220AQ7Z4H9 259 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 RANBP3LQ86VV4 465 aaPredicted RBP13.24□□□□□ -0.29
SMC6-201ENST00000351948 ARHGEF3Q9NR81 526 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 C5AR2Q9P296 337 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 IKZF2Q9UKS7 526 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 E7EQ34 232 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 CATSPEREQ5SY80 951 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 C1orf189Q5VU69 101 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 KIAA1161Q6NSJ0 714 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 AHSA2Q719I0 299 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 MYDGFQ969H8 173 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 ANKRD27Q96NW4 1050 aa13.24□□□□□ -0.29
SMC6-201ENST00000351948 RBM4BQ9BQ04 359 aaKnown RBP13.24□□□□□ -0.29
SMC6-201ENST00000351948 RBM4Q9BWF3 364 aaKnown RBP13.24□□□□□ -0.29
SMC6-201ENST00000351948 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.24□□□□□ -0.29
SMC6-201ENST00000351948 COL5A3P25940 1745 aaPredicted RBP13.23□□□□□ -0.29
SMC6-201ENST00000351948 ADAMDEC1O15204 470 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 JMJD7P0C870 316 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 NR2F6P10588 404 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 PFKLP17858 780 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 PDHA2P29803 388 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 DDHD1Q8NEL9 900 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 HUS1BQ8NHY5 278 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 FCRL4Q96PJ5 515 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 TPK1Q9H3S4 243 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 SERHL2Q9H4I8 314 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 ELL3Q9HB65 397 aaPredicted RBP13.23□□□□□ -0.29
SMC6-201ENST00000351948 SERHLQ9NQF3 203 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 CALML5Q9NZT1 146 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 DNAJC15Q9Y5T4 150 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 PRSS51A0A1B0GVH4 220 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 FAM86C2PA6NEL3 165 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 EFCAB10A6NFE3 127 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 EI24O14681 340 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 PCDHGA12O60330 932 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 HCN1O60741 890 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 GABBR2O75899 941 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 CCNB2O95067 398 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 CLCN7P51798 805 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 CDK6Q00534 326 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 TRAF3Q13114 568 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 MADCAM1Q13477 382 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 TMEFF1Q8IYR6 380 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 MRPL38Q96DV4 380 aaKnown RBP13.23□□□□□ -0.29
SMC6-201ENST00000351948 NUAK2Q9H093 628 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 OR51V1Q9H2C8 321 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 IGSF5Q9NSI5 407 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 ARAP2Q8WZ64 1704 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 PPP6CO00743 305 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 MPC1LP0DKB6 136 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 BCKDHAP12694 445 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 C16orf72Q14CZ0 275 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.23□□□□□ -0.29
SMC6-201ENST00000351948 MFSD6LQ8IWD5 586 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 ZCCHC7Q8N3Z6 543 aaKnown RBP13.23□□□□□ -0.29
SMC6-201ENST00000351948 OR8K5Q8NH50 307 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 HSPA12BQ96MM6 686 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 CAB39Q9Y376 341 aaPredicted RBP13.23□□□□□ -0.29
SMC6-201ENST00000351948 CD9P21926 228 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 ZNF140P52738 457 aaPredicted RBP13.23□□□□□ -0.29
SMC6-201ENST00000351948 RPS26P62854 115 aaKnown RBP13.23□□□□□ -0.29
SMC6-201ENST00000351948 MRPL28Q13084 256 aaKnown RBP13.23□□□□□ -0.29
SMC6-201ENST00000351948 NEK10Q6ZWH5 1172 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 PPP1R14AQ96A00 147 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 FARSBQ9NSD9 589 aaKnown RBP13.23□□□□□ -0.29
SMC6-201ENST00000351948 HCN3Q9P1Z3 774 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 RHCGQ9UBD6 479 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 FTSJ1Q9UET6 329 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 IRAK3Q9Y616 596 aa13.23□□□□□ -0.29
SMC6-201ENST00000351948 LOC285095A0A1B0GVY8 99 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 XKRYO14609 159 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 CAPN5O15484 640 aaPredicted RBP13.22□□□□□ -0.29
SMC6-201ENST00000351948 KRT8P05787 483 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 PSMA3P25788 255 aa13.22□□□□□ -0.29
SMC6-201ENST00000351948 ADGRD2Q7Z7M1 963 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms