RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 CAPS2Q9BXY5 557 aa21■□□□□ 0.95
SNX3-202ENST00000349379 CD244Q9BZW8 370 aa21■□□□□ 0.95
SNX3-202ENST00000349379 VPS11Q9H270 941 aa21■□□□□ 0.95
SNX3-202ENST00000349379 EHD1Q9H4M9 534 aa21■□□□□ 0.95
SNX3-202ENST00000349379 ZFP69BQ9UJL9 534 aa21■□□□□ 0.95
SNX3-202ENST00000349379 SYCE1LA8MT33 242 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 SUPT3HB4E1H0 165 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 MAP2K7O14733 419 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 PRPF4O43172 522 aaKnown RBP eCLIP20.99■□□□□ 0.95
SNX3-202ENST00000349379 PRAMEF4O60810 478 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 SUPT3HO75486 399 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 C1QL1O75973 258 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 SLU7O95391 586 aaKnown RBP20.99■□□□□ 0.95
SNX3-202ENST00000349379 S100BP04271 92 aaPredicted RBP20.99■□□□□ 0.95
SNX3-202ENST00000349379 SLC35G6P0C7Q6 338 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 C1GALT1C1LP0DN25 315 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 COL6A2P12110 1019 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 EPORP19235 508 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 FBLP22087 321 aaKnown RBP20.99■□□□□ 0.95
SNX3-202ENST00000349379 VARSP26640 1264 aaKnown RBP20.99■□□□□ 0.95
SNX3-202ENST00000349379 GLRBP48167 497 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 E2F2Q14209 437 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 PRAMEF9Q5VWM5 478 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 TIFABQ6ZNK6 161 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 LRRC70Q7Z2Q7 622 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 TBC1D19Q8N5T2 526 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 ANKRD53Q8N9V6 530 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 KCT2Q8NC54 265 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 NT5CQ8TCD5 201 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 COL26A1Q96A83 441 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 WDR34Q96EX3 536 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 SLC22A7Q9Y694 548 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 SCN2AQ99250 2005 aa20.99■□□□□ 0.95
SNX3-202ENST00000349379 TNRC6AQ8NDV7 1962 aaKnown RBP20.98■□□□□ 0.95
SNX3-202ENST00000349379 A0A0A6YYC8 382 aaPredicted RBP20.98■□□□□ 0.95
SNX3-202ENST00000349379 H0YIG0 161 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 I3L1I5 382 aaPredicted RBP20.98■□□□□ 0.95
SNX3-202ENST00000349379 RFPL1O75677 317 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 NSA2O95478 260 aaKnown RBP20.98■□□□□ 0.95
SNX3-202ENST00000349379 ATXN8OSP0DMR3 200 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 AGTR2P50052 363 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 KLC3Q6P597 504 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 PPP1R32Q7Z5V6 425 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 MRGPREQ86SM8 312 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 AFAP1L2Q8N4X5 818 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 STT3BQ8TCJ2 826 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 NACC2Q96BF6 587 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 MTBPQ96DY7 904 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 MOCOSQ96EN8 888 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 MMABQ96EY8 250 aaPredicted RBP20.98■□□□□ 0.95
SNX3-202ENST00000349379 IP6K3Q96PC2 410 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 NT5DC2Q9H857 520 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 ZNF358Q9NW07 568 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 ZNF282Q9UDV7 671 aaPredicted RBP20.98■□□□□ 0.95
SNX3-202ENST00000349379 MAP4K5Q9Y4K4 846 aa20.98■□□□□ 0.95
SNX3-202ENST00000349379 SFTPCP11686 197 aa20.97■□□□□ 0.95
SNX3-202ENST00000349379 CXCR2P25025 360 aa20.97■□□□□ 0.95
SNX3-202ENST00000349379 OTX2P32243 289 aa20.97■□□□□ 0.95
SNX3-202ENST00000349379 PCDH1Q08174 1060 aa20.97■□□□□ 0.95
SNX3-202ENST00000349379 KCNAB2Q13303 367 aa20.97■□□□□ 0.95
SNX3-202ENST00000349379 SETDB1Q15047 1291 aa20.97■□□□□ 0.95
SNX3-202ENST00000349379 PDK4Q16654 411 aa20.97■□□□□ 0.95
SNX3-202ENST00000349379 LGSNQ5TDP6 509 aa20.97■□□□□ 0.95
SNX3-202ENST00000349379 CPZQ66K79 652 aa20.97■□□□□ 0.95
SNX3-202ENST00000349379 PRSS41Q7RTY9 318 aa20.97■□□□□ 0.95
SNX3-202ENST00000349379 CNPY4Q8N129 248 aa20.97■□□□□ 0.95
SNX3-202ENST00000349379 TRIM55Q9BYV6 548 aa20.97■□□□□ 0.95
SNX3-202ENST00000349379 TGIF2Q9GZN2 237 aa20.97■□□□□ 0.95
SNX3-202ENST00000349379 PITHD1Q9GZP4 211 aaPredicted RBP20.97■□□□□ 0.95
SNX3-202ENST00000349379 TLN1Q9Y490 2541 aaKnown RBP20.97■□□□□ 0.95
SNX3-202ENST00000349379 K7EPI3 171 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 NDUFS4O43181 175 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 CCNT2O60583 730 aaKnown RBP20.96■□□□□ 0.95
SNX3-202ENST00000349379 PRB1P04280 392 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 ZGLP1P0C6A0 271 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 MMP11P24347 488 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 ALDH18A1P54886 795 aaKnown RBP20.96■□□□□ 0.95
SNX3-202ENST00000349379 VSNL1P62760 191 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 HYAL2Q12891 473 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 ATP1A4Q13733 1029 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 SLBPQ14493 270 aaKnown RBP eCLIP20.96■□□□□ 0.95
SNX3-202ENST00000349379 NAA30Q147X3 362 aaPredicted RBP20.96■□□□□ 0.95
SNX3-202ENST00000349379 TSNAXIP1Q2TAA8 658 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 PDSS2Q86YH6 399 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 TRPV3Q8NET8 790 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 OR9A4Q8NGU2 314 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 CREB3L4Q8TEY5 395 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 MZB1Q8WU39 189 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 SLC6A16Q9GZN6 736 aa20.96■□□□□ 0.95
SNX3-202ENST00000349379 SOX17Q9H6I2 414 aaPredicted RBP20.96■□□□□ 0.95
SNX3-202ENST00000349379 MKKSQ9NPJ1 570 aaPredicted RBP20.96■□□□□ 0.95
SNX3-202ENST00000349379 ARGFXA6NJG6 315 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 CLGNO14967 610 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 RBP1P09455 135 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 IL1RNP18510 177 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 CD22P20273 847 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 GSTM2P28161 218 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 CASP2P42575 452 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 AVPR1BP47901 424 aa20.95■□□□□ 0.94
SNX3-202ENST00000349379 OCA2Q04671 838 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms