RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 RPS13P62277 151 aaKnown RBP25.89■■□□□ 1.74
SSBP4-202ENST00000348495 HMGCS1Q01581 520 aa25.89■■□□□ 1.74
SSBP4-202ENST00000348495 CYP4F3Q08477 520 aa25.89■■□□□ 1.74
SSBP4-202ENST00000348495 TERF2Q15554 542 aa25.89■■□□□ 1.74
SSBP4-202ENST00000348495 LSM12Q3MHD2 195 aaKnown RBP25.89■■□□□ 1.74
SSBP4-202ENST00000348495 VN1R4Q7Z5H5 301 aa25.89■■□□□ 1.74
SSBP4-202ENST00000348495 CCDC28BQ9BUN5 200 aa25.89■■□□□ 1.74
SSBP4-202ENST00000348495 TCF7L2Q9NQB0 619 aa25.89■■□□□ 1.74
SSBP4-202ENST00000348495 RIC8BQ9NVN3 520 aa25.89■■□□□ 1.74
SSBP4-202ENST00000348495 ARL2BPQ9Y2Y0 163 aa25.89■■□□□ 1.74
SSBP4-202ENST00000348495 ANKDD1BA6NHY2 528 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 LSM1O15116 133 aaKnown RBP25.88■■□□□ 1.73
SSBP4-202ENST00000348495 VPS4BO75351 444 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 CLEC3AO75596 197 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 RASSF9O75901 435 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 ETHE1O95571 254 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 PRPH2P23942 346 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 LIMK1P53667 647 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 DNAJC22Q8N4W6 341 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 TUBGCP3Q96CW5 907 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 A0A0J9YVX5 310 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 RGS14O43566 566 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 CYP4F2P78329 520 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 PHEXP78562 749 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 ACAD11Q709F0 780 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 ANKS4BQ8N8V4 417 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 KLHL6Q8WZ60 621 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 MS4A8Q9BY19 250 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 GIMAP2Q9UG22 337 aa25.88■■□□□ 1.73
SSBP4-202ENST00000348495 RIF1Q5UIP0 2472 aaKnown RBP25.87■■□□□ 1.73
SSBP4-202ENST00000348495 HCRTR1O43613 425 aa25.87■■□□□ 1.73
SSBP4-202ENST00000348495 RSL1D1O76021 490 aaKnown RBP25.87■■□□□ 1.73
SSBP4-202ENST00000348495 ANKRD34CP0C6C1 535 aa25.87■■□□□ 1.73
SSBP4-202ENST00000348495 THRAP10827 490 aa25.87■■□□□ 1.73
SSBP4-202ENST00000348495 GABRA4P48169 554 aa25.87■■□□□ 1.73
SSBP4-202ENST00000348495 FRMPD2BQ6IN97 320 aa25.87■■□□□ 1.73
SSBP4-202ENST00000348495 KMT5CQ86Y97 462 aa25.87■■□□□ 1.73
SSBP4-202ENST00000348495 TRPV3Q8NET8 790 aa25.87■■□□□ 1.73
SSBP4-202ENST00000348495 CEP70Q8NHQ1 597 aa25.87■■□□□ 1.73
SSBP4-202ENST00000348495 TM4SF19Q96DZ7 209 aa25.87■■□□□ 1.73
SSBP4-202ENST00000348495 SLC41A2Q96JW4 573 aa25.87■■□□□ 1.73
SSBP4-202ENST00000348495 GFM1Q96RP9 751 aaKnown RBP25.87■■□□□ 1.73
SSBP4-202ENST00000348495 D6RAR5 112 aa25.86■■□□□ 1.73
SSBP4-202ENST00000348495 TGFB1P01137 390 aa25.86■■□□□ 1.73
SSBP4-202ENST00000348495 ILKQ13418 452 aa25.86■■□□□ 1.73
SSBP4-202ENST00000348495 IMPG1Q17R60 797 aa25.86■■□□□ 1.73
SSBP4-202ENST00000348495 C6orf136Q5SQH8 315 aa25.86■■□□□ 1.73
SSBP4-202ENST00000348495 ARHGAP22Q7Z5H3 698 aa25.86■■□□□ 1.73
SSBP4-202ENST00000348495 CCDC197Q8NCU1 140 aa25.86■■□□□ 1.73
SSBP4-202ENST00000348495 RILPQ96NA2 401 aa25.86■■□□□ 1.73
SSBP4-202ENST00000348495 ZNF768Q9H5H4 540 aaKnown RBP25.86■■□□□ 1.73
SSBP4-202ENST00000348495 VPS29Q9UBQ0 182 aa25.86■■□□□ 1.73
SSBP4-202ENST00000348495 SLC12A4Q9UP95 1085 aa25.86■■□□□ 1.73
SSBP4-202ENST00000348495 LOC105369274A0A096LPK9 316 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 LOC102723532A0A0G2JNH3 316 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 IGHV5-10-1A0A0J9YXX1 117 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 LOC105378220A0A1B0GUY1 285 aaPredicted RBP25.85■■□□□ 1.73
SSBP4-202ENST00000348495 PTX3P26022 381 aaPredicted RBP25.85■■□□□ 1.73
SSBP4-202ENST00000348495 HSD11B2P80365 405 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 GABPB1Q06547 395 aaPredicted RBP25.85■■□□□ 1.73
SSBP4-202ENST00000348495 HYAL2Q12891 473 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 NR6A1Q15406 480 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 SNAP47Q5SQN1 464 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 OGFOD2Q6N063 350 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 OR4N4Q8N0Y3 316 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 WDR48Q8TAF3 677 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 CMTM7Q96FZ5 175 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 SERPINI1Q99574 410 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 OR51B5Q9H339 312 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 SYNDIG1Q9H7V2 258 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 ZKSCAN7Q9P0L1 754 aaPredicted RBP25.85■■□□□ 1.73
SSBP4-202ENST00000348495 H0YGG7 62 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 PEX11AO75192 247 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 ARF3P61204 181 aaPredicted RBP25.85■■□□□ 1.73
SSBP4-202ENST00000348495 CUL3Q13618 768 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 KIAA0040Q15053 153 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 ADPRMQ3LIE5 342 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 ATP6AP1LQ52LC2 224 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 ZC3H12BQ5HYM0 836 aaKnown RBP25.85■■□□□ 1.73
SSBP4-202ENST00000348495 ASPGQ86U10 573 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 SLITRK4Q8IW52 837 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 D2HGDHQ8N465 521 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 PPP3R2Q96LZ3 170 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 AICDAQ9GZX7 198 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 PDE7BQ9NP56 450 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 SOHLH2Q9NX45 425 aa25.85■■□□□ 1.73
SSBP4-202ENST00000348495 SERPINA6P08185 405 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 LBPP18428 481 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 NELFEP18615 380 aaKnown RBP25.84■■□□□ 1.73
SSBP4-202ENST00000348495 TBL3Q12788 808 aaKnown RBP25.84■■□□□ 1.73
SSBP4-202ENST00000348495 PWP1Q13610 501 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 AP5B1Q2VPB7 878 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 DEPDC1Q5TB30 811 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 KHDRBS2Q5VWX1 349 aaKnown RBP25.84■■□□□ 1.73
SSBP4-202ENST00000348495 METTL21CQ5VZV1 264 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 NXNQ6DKJ4 435 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 CHSY3Q70JA7 882 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 GLRX5Q86SX6 157 aa25.84■■□□□ 1.73
SSBP4-202ENST00000348495 ALYREFQ86V81 257 aaKnown RBP25.84■■□□□ 1.73
SSBP4-202ENST00000348495 MCATQ8IVS2 390 aaKnown RBP25.84■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms