RNA–Protein interactions for RNA: ENST00000347652.6

VCAM1-202, Transcript of vascular cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene VCAM1, Length 2,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-202ENST00000347652 CHRNA9Q9UGM1 479 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 ADAMTS6Q9UKP5 1117 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 CNOT11Q9UKZ1 510 aaKnown RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 SNX6Q9UNH7 406 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 ZFR2Q9UPR6 939 aaKnown RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 PKP3Q9Y446 797 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 DYNC1LI1Q9Y6G9 523 aaKnown RBP5□□□□□ -1.61
VCAM1-202ENST00000347652 RALGAPA1Q6GYQ0 2036 aa5□□□□□ -1.61
VCAM1-202ENST00000347652 PLXND1Q9Y4D7 1925 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 C5orf51A6NDU8 294 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 H0YIV9 168 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 STX7O15400 261 aaKnown RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 GFRA3O60609 400 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 SPAG6O75602 509 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 C1QAP02745 245 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 ELFN1P0C7U0 828 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 CKMT2P17540 419 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 MAOBP27338 520 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 MSX1P28360 303 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 SSTR1P30872 391 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 S100A5P33763 92 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 XIAPP98170 497 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 SF3A3Q12874 501 aaKnown RBP eCLIP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 PEX6Q13608 980 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 IL11RAQ14626 422 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 RPS6KA2Q15349 733 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 UAP1Q16222 522 aaPredicted RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 PLK5Q496M5 336 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TCTE1Q5JU00 501 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 ZDHHC20Q5W0Z9 365 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TCEAL6Q6IPX3 200 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 KIAA1161Q6NSJ0 714 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 PAPD4Q6PIY7 484 aaKnown RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 RFLNAQ6ZTI6 216 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 NFKBIDQ8NI38 313 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 DTX3LQ8TDB6 740 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 BRIX1Q8TDN6 353 aaKnown RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TCEAL3Q969E4 200 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 FAM122AQ96E09 287 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TOE1Q96GM8 510 aaKnown RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 CDKN2AIPNLQ96HQ2 116 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 SAMD8Q96LT4 415 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 CCDC140Q96MF4 163 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 DGAT2Q96PD7 388 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 MECRQ9BV79 373 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 NSRP1Q9H0G5 558 aaKnown RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 STN1Q9H668 368 aaKnown RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 PARD6AQ9NPB6 346 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 RAD18Q9NS91 495 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TMEM74BQ9NUR3 256 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 WSB2Q9NYS7 404 aaPredicted RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 PKD2L2Q9NZM6 624 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 ADAM30Q9UKF2 790 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 ANGPTL2Q9UKU9 493 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TNRC6BQ9UPQ9 1833 aaKnown RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 PI4KAP42356 2102 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 CEP250Q9BV73 2442 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TBC1D3DA0A087WVF3 549 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TBC1D3IA0A087WXS9 549 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TBC1D3EA0A087X179 549 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TBC1D3KA0A087X1G2 549 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 OR6C74A6NCV1 312 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TBC1D3FA6NER0 549 aaPredicted RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 MFSD2BA6NFX1 497 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 IGLON5A6NGN9 336 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 FAM47DPA6NHR8 397 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 FAM90A20PA6NIJ5 464 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 PATE3B3GLJ2 98 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TBC1D3LB9A6J9 549 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 PROB1E7EW31 1015 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 GAPDHSO14556 408 aaPredicted RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 ARHGAP33O14559 1287 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TM7SF2O76062 418 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 PCDH8O95206 1070 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 ABCB1P08183 1280 aaPredicted RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 ABHD2P08910 425 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TBC1D3HP0C7X1 549 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 PHBP35232 272 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 HSD17B3P37058 310 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 SPAM1P38567 509 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 ETV3P41162 512 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 RPS21P63220 83 aaKnown RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 SNTB1Q13884 538 aaKnown RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 ACOX1Q15067 660 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TAF1BQ53T94 588 aaPredicted RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 SEL1L3Q68CR1 1132 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TBC1D3GQ6DHY5 549 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 SULT1C3Q6IMI6 304 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TBC1D3CQ6IPX1 549 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TRMT10BQ6PF06 316 aaKnown RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 KLHL35Q6PF15 583 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 THSD4Q6ZMP0 1018 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 MICALCLQ6ZW33 695 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TRIM69Q86WT6 500 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 UNC5BQ8IZJ1 945 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 TBC1D3Q8IZP1 549 aaPredicted RBP4.99□□□□□ -1.61
VCAM1-202ENST00000347652 GPR26Q8NDV2 337 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 SETD6Q8TBK2 473 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 DTD2Q96FN9 168 aa4.99□□□□□ -1.61
VCAM1-202ENST00000347652 PLEKHG4BQ96PX9 1271 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms