RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 THAP11Q96EK4 314 aa17.15■□□□□ 0.34
USF2-202ENST00000343550 TSNARE1Q96NA8 513 aa17.15■□□□□ 0.34
USF2-202ENST00000343550 VPS11Q9H270 941 aa17.15■□□□□ 0.34
USF2-202ENST00000343550 RUVBL1Q9Y265 456 aaKnown RBP17.15■□□□□ 0.34
USF2-202ENST00000343550 PADI2Q9Y2J8 665 aa17.15■□□□□ 0.34
USF2-202ENST00000343550 MED13Q9UHV7 2174 aa17.14■□□□□ 0.34
USF2-202ENST00000343550 FER1L5A0AVI2 2057 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 A6NL46 340 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 TXNDC9O14530 226 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 KERAO60938 352 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 KLF7O75840 302 aaPredicted RBP17.14■□□□□ 0.33
USF2-202ENST00000343550 SORBS2O94875 1100 aaKnown RBP17.14■□□□□ 0.33
USF2-202ENST00000343550 WDR47O94967 919 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 GNLYP22749 145 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 GRK3P35626 688 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 RRADP55042 308 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 MEF2AQ02078 507 aaPredicted RBP17.14■□□□□ 0.33
USF2-202ENST00000343550 ATP1A4Q13733 1029 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 FBXO48Q5FWF7 155 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 MLIPQ5VWP3 458 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 VN1R4Q7Z5H5 301 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 PLD6Q8N2A8 252 aaKnown RBP17.14■□□□□ 0.33
USF2-202ENST00000343550 ARHGEF39Q8N4T4 335 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 DTWD1Q8N5C7 304 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 TM4SF19Q96DZ7 209 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 C17orf62Q9BQA9 187 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 TMEM79Q9BSE2 394 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 SARGQ9BW04 601 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 NUDT9Q9BW91 350 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 CNOT10Q9H9A5 744 aaKnown RBP17.14■□□□□ 0.33
USF2-202ENST00000343550 IFT80Q9P2H3 777 aaPredicted RBP17.14■□□□□ 0.33
USF2-202ENST00000343550 FETUBQ9UGM5 382 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 DYRK1BQ9Y463 629 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 MAP4K5Q9Y4K4 846 aa17.14■□□□□ 0.33
USF2-202ENST00000343550 CCDC189A1A4V9 331 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 MAP2K7O14733 419 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 DPM1O60762 260 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 STK16O75716 305 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 ATXN8OSP0DMR3 200 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 MTHFD2P13995 350 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 BCL6P41182 706 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 GLRBP48167 497 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 HSPA7P48741 367 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 VSNL1P62760 191 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 MUM1Q2TAK8 710 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 JMJD6Q6NYC1 403 aaPredicted RBP17.13■□□□□ 0.33
USF2-202ENST00000343550 MRPL14Q6P1L8 145 aaKnown RBP17.13■□□□□ 0.33
USF2-202ENST00000343550 NXPE4Q6UWF7 544 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 RAB43Q86YS6 212 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 HPS6Q86YV9 775 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 ZNF740Q8NDX6 193 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.13■□□□□ 0.33
USF2-202ENST00000343550 CABS1Q96KC9 395 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 C10orf90Q96M02 699 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 GPR83Q9NYM4 423 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 WWOXQ9NZC7 414 aa17.13■□□□□ 0.33
USF2-202ENST00000343550 BLACEA4D250 179 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 UBXN8O00124 270 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 P2RX6O15547 441 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 S100BP04271 92 aaPredicted RBP17.12■□□□□ 0.33
USF2-202ENST00000343550 CD63P08962 238 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 PIM1P11309 404 aaPredicted RBP17.12■□□□□ 0.33
USF2-202ENST00000343550 GNAZP19086 355 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 OTX2P32243 289 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 OR1D4P47884 311 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 SSPNQ14714 243 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 SLC9A5Q14940 896 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 GARNL3Q5VVW2 1013 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 KLC3Q6P597 504 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 TIFABQ6ZNK6 161 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 OVCH1Q7RTY7 1134 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 MFSD9Q8NBP5 474 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 EXT2Q93063 718 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 MACROD1Q9BQ69 325 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 CCDC77Q9BR77 488 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 CAPS2Q9BXY5 557 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 CD244Q9BZW8 370 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 PELI2Q9HAT8 420 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 ZNF358Q9NW07 568 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 NUDT4Q9NZJ9 180 aa17.12■□□□□ 0.33
USF2-202ENST00000343550 GPN3Q9UHW5 284 aaPredicted RBP17.12■□□□□ 0.33
USF2-202ENST00000343550 TRBC2A0A5B9 178 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 SYCE1LA8MT33 242 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 SUPT3HB4E1H0 165 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 OR1F1O43749 312 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 CNOT3O75175 753 aaKnown RBP17.11■□□□□ 0.33
USF2-202ENST00000343550 SUPT3HO75486 399 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 IPO13O94829 963 aaKnown RBP17.11■□□□□ 0.33
USF2-202ENST00000343550 STATHP02808 62 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 C1GALT1C1LP0DN25 315 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 COL6A2P12110 1019 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 CDC16Q13042 620 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 INPP5JQ15735 1006 aaPredicted RBP17.11■□□□□ 0.33
USF2-202ENST00000343550 WDR93Q6P2C0 686 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 PRMT9Q6P2P2 845 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 SLCO4C1Q6ZQN7 724 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 METTL27Q8N6F8 245 aaPredicted RBP17.11■□□□□ 0.33
USF2-202ENST00000343550 UBLCP1Q8WVY7 318 aaPredicted RBP17.11■□□□□ 0.33
USF2-202ENST00000343550 SLC13A3Q8WWT9 602 aa17.11■□□□□ 0.33
USF2-202ENST00000343550 MTBPQ96DY7 904 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms