RNA–Protein interactions for RNA: ENST00000342084.8

PTPRR-202, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRR, Length 2,037 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-202ENST00000342084 LMLNQ96KR4 655 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 FCRL1Q96LA6 429 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 MCCC1Q96RQ3 725 aaPredicted RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 TSEN34Q9BSV6 310 aaKnown RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 RIOK2Q9BVS4 552 aaKnown RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 SLIRPQ9GZT3 109 aaKnown RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 RAD18Q9NS91 495 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 TAS2R16Q9NYV7 291 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 SH3BP4Q9P0V3 963 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 TMED5Q9Y3A6 229 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 PCDHGB1Q9Y5G3 927 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 PRAMEF25A6NGN4 478 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 EFCAB9A8MZ26 197 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 M0R082 166 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 ARHGEF15O94989 841 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 URODP06132 367 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 MPC1LP0DKB6 136 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 POU2F1P14859 743 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 MAGP20916 626 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 GADD45AP24522 165 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 PDHA2P29803 388 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 CRATP43155 626 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 EIF2B2P49770 351 aaKnown RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 ST13P50502 369 aaKnown RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 RPS13P62277 151 aaKnown RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 MC1RQ01726 317 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 MEF2AQ02078 507 aaPredicted RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 SRSF11Q05519 484 aaKnown RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 RAB33AQ14088 237 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 HIST2H2ACQ16777 129 aaPredicted RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 DGUOKQ16854 277 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 SYTL3Q4VX76 610 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 COLEC12Q5KU26 742 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 AGTRAPQ6RW13 159 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 HTR3DQ70Z44 454 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 TMPRSS11BQ86T26 416 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 SLC22A16Q86VW1 577 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 PLD3Q8IV08 490 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 NLGN4XQ8N0W4 816 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 MMP21Q8N119 569 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 CADM3Q8N126 398 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 SLC39A11Q8N1S5 342 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 SLC5A8Q8N695 610 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 OR9Q2Q8NGE9 314 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 HUS1BQ8NHY5 278 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 PSMA8Q8TAA3 256 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 MRPS31Q92665 395 aaKnown RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 CIDECQ96AQ7 238 aaPredicted RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 LGALS12Q96DT0 336 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 VMP1Q96GC9 406 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 FEVQ99581 238 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 NIPSNAP1Q9BPW8 284 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 COPS4Q9BT78 406 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 MROQ9BYG7 248 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 ASPSCR1Q9BZE9 553 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 WDR12Q9GZL7 423 aaKnown RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 CHST8Q9H2A9 424 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 TRIM39Q9HCM9 518 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 SPATA6Q9NWH7 488 aaPredicted RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 HCFC1R1Q9NWW0 138 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 STOX2Q9P2F5 926 aaPredicted RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 RHCGQ9UBD6 479 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 EXO1Q9UQ84 846 aaKnown RBP7.01□□□□□ -1.29
PTPRR-202ENST00000342084 ITM2BQ9Y287 266 aa7.01□□□□□ -1.29
PTPRR-202ENST00000342084 LOC100506127A0A0U1RQW1 187 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 GNG14A0A1W2PPG7 69 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 C1orf226A1L170 272 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 FAM227AF5H4B4 570 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 TNFRSF11BO00300 401 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 SUV39H1O43463 412 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 RFPL2O75678 378 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 SLC16A8O95907 504 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 ADRA2AP08913 450 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 GSTM1P09488 218 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 DBTP11182 482 aaKnown RBP7□□□□□ -1.29
PTPRR-202ENST00000342084 HLA-EP13747 358 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 TGM1P22735 817 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 IMPA1P29218 277 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 CD40LGP29965 261 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 WEE1P30291 646 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 CCR2P41597 374 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 PPP3CCP48454 512 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 IDH2P48735 452 aaKnown RBP7□□□□□ -1.29
PTPRR-202ENST00000342084 CDH12P55289 794 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 DEFB103AP81534 67 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 SPIBQ01892 262 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 CSTF3Q12996 717 aaKnown RBP7□□□□□ -1.29
PTPRR-202ENST00000342084 SLC13A2Q13183 592 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 RGNQ15493 299 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 PRSS53Q2L4Q9 553 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 EXOC3L2Q2M3D2 409 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 PLEKHS1Q5SXH7 462 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 CPTPQ5TA50 214 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 GDPD4Q6W3E5 623 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 PRSS48Q7RTY5 328 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 TSPYL5Q86VY4 417 aaPredicted RBP7□□□□□ -1.29
PTPRR-202ENST00000342084 TMC8Q8IU68 726 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 NPAS3Q8IXF0 933 aa7□□□□□ -1.29
PTPRR-202ENST00000342084 RAVER1Q8IY67 606 aaKnown RBP7□□□□□ -1.29
PTPRR-202ENST00000342084 ELMOD1Q8N336 334 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms