RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 TP53INP2Q8IXH6 220 aa9.35□□□□□ -0.91
PTCHD4-201ENST00000339488 PGBD3Q8N328 593 aa9.35□□□□□ -0.91
PTCHD4-201ENST00000339488 FTMTQ8N4E7 242 aa9.35□□□□□ -0.91
PTCHD4-201ENST00000339488 MYDGFQ969H8 173 aa9.35□□□□□ -0.91
PTCHD4-201ENST00000339488 RNF34Q969K3 372 aa9.35□□□□□ -0.91
PTCHD4-201ENST00000339488 RTP4Q96DX8 246 aa9.35□□□□□ -0.91
PTCHD4-201ENST00000339488 RDH12Q96NR8 316 aa9.35□□□□□ -0.91
PTCHD4-201ENST00000339488 GMLQ99445 158 aa9.35□□□□□ -0.91
PTCHD4-201ENST00000339488 PTDSS2Q9BVG9 487 aa9.35□□□□□ -0.91
PTCHD4-201ENST00000339488 QRSL1Q9H0R6 528 aaKnown RBP9.35□□□□□ -0.91
PTCHD4-201ENST00000339488 PDLIM7Q9NR12 457 aa9.35□□□□□ -0.91
PTCHD4-201ENST00000339488 UBP1Q9NZI7 540 aa9.35□□□□□ -0.91
PTCHD4-201ENST00000339488 C17orf113A0A1B0GUU1 675 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 PQLC2LA1A4F0 135 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 BCLAF3A2AJT9 711 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 TMEM200CA6NKL6 621 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 KRBOX1C9JBD0 128 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 ORC5O43913 435 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 CREG1O75629 220 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 CYP17A1P05093 508 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 SLC2A2P11168 524 aaPredicted RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 NR2C1P13056 603 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 CLDN20P56880 219 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 ACY1Q03154 408 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 CLINT1Q14677 625 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 KLHL26Q53HC5 615 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 ANKRD39Q53RE8 183 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 CELF3Q5SZQ8 465 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 ZNF57Q68EA5 555 aaPredicted RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 BLOC1S3Q6QNY0 202 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 CATSPERGQ6ZRH7 1159 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 PIWIL4Q7Z3Z4 852 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 C12orf40Q86WS4 652 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 TMEM145Q8NBT3 493 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 OR2T4Q8NH00 348 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 FAM162AQ96A26 154 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 CRELD1Q96HD1 420 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 TSGA13Q96PP4 275 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 VRK1Q99986 396 aaPredicted RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 SARGQ9BW04 601 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 SEMA4CQ9C0C4 833 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 PIGUQ9H490 435 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 SLC28A3Q9HAS3 691 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 LYARQ9NX58 379 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 DHCR7Q9UBM7 475 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 GHRLQ9UBU3 117 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 PURGQ9UJV8 347 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 ADAM28Q9UKQ2 775 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 NCKAP1Q9Y2A7 1128 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 DNAJC15Q9Y5T4 150 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 ZCWPW2A0A1B0GU75 182 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 METTL21EPA6NDL7 271 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 A8MXK9 166 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 ARVCFO00192 962 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 PMM2O15305 246 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 PRPSAP2O60256 369 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 MICAL2O94851 1124 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 SIX3O95343 332 aaPredicted RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 ATG7O95352 703 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 C9P02748 559 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 ADRB1P08588 477 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 NMBP08949 121 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 NMBRP28336 390 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 VIPR1P32241 457 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 CTSCP53634 463 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 RPP30P78346 268 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 SLC3A1Q07837 685 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 HNRNPA0Q13151 305 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 MELKQ14680 651 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 SSX1Q16384 188 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 C4orf46Q504U0 113 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 CAPN13Q6MZZ7 669 aaPredicted RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 ASB18Q6ZVZ8 466 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 CHST14Q8NCH0 376 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 LPCAT1Q8NF37 534 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 OR5K1Q8NHB7 308 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 GTF3AQ92664 365 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 KIAA1191Q96A73 305 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 EMID1Q96A84 441 aaPredicted RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 RHBDF1Q96CC6 855 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 MFSD14AQ96MC6 490 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 NSUN5Q96P11 429 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 KCNC2Q96PR1 638 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 SIGLEC11Q96RL6 698 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 SLC38A3Q99624 504 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 GAL3ST1Q99999 423 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 DPYSL5Q9BPU6 564 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 CHIAQ9BZP6 476 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 RBFOX1Q9NWB1 397 aaKnown RBP9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 SPHK1Q9NYA1 384 aa9.34□□□□□ -0.91
PTCHD4-201ENST00000339488 IGLV3-22A0A075B6J6 115 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 PSMD10O75832 226 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 S100A9P06702 114 aaKnown RBP9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 APOA4P06727 396 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 COX5BP10606 129 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 DNASE1P24855 282 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 HOXA9P31269 272 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 DGKEP52429 567 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 GTF2BQ00403 316 aa9.34□□□□□ -0.92
PTCHD4-201ENST00000339488 MEF2AQ02078 507 aaPredicted RBP9.34□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms