RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 CDK4P11802 303 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 ACP5P13686 325 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 PRPS1L1P21108 318 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 TGFBR1P36897 503 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 MASP1P48740 699 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 ENTPD1P49961 510 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 ESRRGP62508 458 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 C2orf80Q0P641 193 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 PPIGQ13427 754 aaKnown RBP eCLIP8.51□□□□□ -1.05
SNCA-201ENST00000336904 FXNQ16595 210 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 MPEG1Q2M385 716 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 VMACQ2NL98 169 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 RPS26P11Q5JNZ5 115 aaPredicted RBP8.51□□□□□ -1.05
SNCA-201ENST00000336904 PSRC1Q6PGN9 363 aaPredicted RBP8.51□□□□□ -1.05
SNCA-201ENST00000336904 CALHM3Q86XJ0 350 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 C8orf59Q8N0T1 100 aaPredicted RBP8.51□□□□□ -1.05
SNCA-201ENST00000336904 EID3Q8N140 333 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 CACTIN-AS1Q8N1I8 211 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 PACRGLQ8N7B6 248 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 AMER3Q8N944 861 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 OR8D1Q8WZ84 308 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 CCDC138Q96M89 665 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 COQ10AQ96MF6 247 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 PRAP1Q96NZ9 151 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 F2RL3Q96RI0 385 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 SH3GL3Q99963 347 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 OSBPL10Q9BXB5 764 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 LHPPQ9H008 270 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 MUC13Q9H3R2 512 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 WBP1LQ9NX94 342 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 SAMHD1Q9Y3Z3 626 aaKnown RBP8.51□□□□□ -1.05
SNCA-201ENST00000336904 PLXNA2O75051 1894 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 C2orf16Q68DN1 1984 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 SNRNP200O75643 2136 aaKnown RBP8.51□□□□□ -1.05
SNCA-201ENST00000336904 DYTNA2CJ06 578 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 OR52A4PA6NMU1 304 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 FAM220BPB1ANY3 271 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 H3BMQ9 156 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 TOR1BO14657 336 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 NARSO43776 548 aaKnown RBP8.51□□□□□ -1.05
SNCA-201ENST00000336904 INMTO95050 263 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 SCELO95171 688 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 IL3P08700 152 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 HOXB9P17482 250 aaPredicted RBP8.51□□□□□ -1.05
SNCA-201ENST00000336904 IGFBP5P24593 272 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 TIE1P35590 1138 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 DAPP51397 102 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 PPP2R2BQ00005 443 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 HNRNPA1L2Q32P51 320 aaKnown RBP8.51□□□□□ -1.05
SNCA-201ENST00000336904 LRIF1Q5T3J3 769 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 GPR153Q6NV75 609 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 MED27Q6P2C8 311 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 FBXO46Q6PJ61 603 aaPredicted RBP8.51□□□□□ -1.05
SNCA-201ENST00000336904 HORMAD1Q86X24 394 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 TCAIMQ8N3R3 496 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 ARL10Q8N8L6 244 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 ATG16L2Q8NAA4 619 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 CHDHQ8NE62 594 aaPredicted RBP8.51□□□□□ -1.05
SNCA-201ENST00000336904 NFKBIDQ8NI38 313 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 DOK4Q8TEW6 326 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 SUSD6Q92537 303 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 HSPBAP1Q96EW2 488 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 COG8Q96MW5 612 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 KCNC2Q96PR1 638 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 RUBCNLQ9H714 662 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 GPATCH2Q9NW75 528 aa8.51□□□□□ -1.05
SNCA-201ENST00000336904 SPATA6Q9NWH7 488 aaPredicted RBP8.51□□□□□ -1.05
SNCA-201ENST00000336904 LOC100130705A0A1B0GUX0 176 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 EPOPA6NHQ4 379 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 LILRB5O75023 590 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 MYO1DO94832 1006 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 VIPP01282 170 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 FUCA1P04066 466 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 PTNP21246 168 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 IDSP22304 550 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 KDELR2P33947 212 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 CLCNKAP51800 687 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 PTPN5P54829 565 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 SP140Q13342 867 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 GGTA1PQ4G0N0 100 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 ATG9BQ674R7 924 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 GRHL2Q6ISB3 625 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 TNFAIP8L2Q6P589 184 aaPredicted RBP8.5□□□□□ -1.05
SNCA-201ENST00000336904 USP51Q70EK9 711 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 THAP5Q7Z6K1 395 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 RNF130Q86XS8 419 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 DCP2Q8IU60 420 aaKnown RBP8.5□□□□□ -1.05
SNCA-201ENST00000336904 ETFBKMTQ8IXQ9 262 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 FRMD1Q8N878 549 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 ZNF555Q8NEP9 628 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 TNIP2Q8NFZ5 429 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 CSGALNACT1Q8TDX6 532 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 RAB8BQ92930 207 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 GLMNQ92990 594 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 TESCQ96BS2 214 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 REXO5Q96IC2 774 aaKnown RBP8.5□□□□□ -1.05
SNCA-201ENST00000336904 ASB16Q96NS5 453 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 CCDC115Q96NT0 180 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 SH3GL1Q99961 368 aa8.5□□□□□ -1.05
SNCA-201ENST00000336904 ANKRA2Q9H9E1 313 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms