RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 ZFP41Q8N8Y5 198 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 C11orf65Q8NCR3 313 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 OR9Q1Q8NGQ5 310 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 SUSD6Q92537 303 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 KCNN1Q92952 543 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 ACDQ96AP0 544 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 C1GALT1C1Q96EU7 318 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 COX4I2Q96KJ9 171 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 Q96MT0 163 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 CARS2Q9HA77 564 aaKnown RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 RAD18Q9NS91 495 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 STOX2Q9P2F5 926 aaPredicted RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 SEC14L3Q9UDX4 400 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 ATP6V1HQ9UI12 483 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 MED16Q9Y2X0 877 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 DOCK1Q14185 1865 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 FRS3O43559 492 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 TLL1O43897 1013 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 ATG13O75143 517 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 BCAS1O75363 584 aaPredicted RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 FGF18O76093 207 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 SCELO95171 688 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 ADH1AP07327 375 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 HTR1EP28566 365 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 SSR2P43308 183 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 CSNK1DP48730 415 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 RPL26P61254 145 aaKnown RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 MGAT3Q09327 533 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 SLC14A1Q13336 389 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 HSD11B1LQ7Z5J1 315 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 BCDIN3DQ7Z5W3 292 aaKnown RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 PARGQ86W56 976 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 YAF2Q8IY57 180 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 DCAF4L2Q8NA75 395 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 OR5K1Q8NHB7 308 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 HUS1BQ8NHY5 278 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 ZFP90Q8TF47 636 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 COL21A1Q96P44 957 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 FERD3LQ96RJ6 166 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 HTATIP2Q9BUP3 242 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 SLC46A2Q9BY10 475 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 KCNK12Q9HB15 430 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 ARMC1Q9NVT9 282 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 ANGPT4Q9Y264 503 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 CORINQ9Y5Q5 1042 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 SCN3AQ9NY46 2000 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 MYLKQ15746 1914 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 CPSF4LA6NMK7 179 aaKnown RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 GRM6O15303 877 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 ABCB7O75027 752 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 POP7O75817 140 aaKnown RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 CSF2P04141 144 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 LHCGRP22888 699 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 MYF6P23409 242 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 TTKP33981 857 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 TIGD6Q17RP2 521 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 PDCD4Q53EL6 469 aaKnown RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 CAPN13Q6MZZ7 669 aaPredicted RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 PSRC1Q6PGN9 363 aaPredicted RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 ZNF773Q6PK81 442 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 PEX5LQ8IYB4 626 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 OR10G2Q8NGC3 310 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 SLC9A6Q92581 669 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 TOP1MTQ969P6 601 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 PRR14Q9BWN1 585 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 DCSTAMPQ9H295 470 aa7.95□□□□□ -1.14
HPS4-201ENST00000336873 ZBTB20Q9HC78 741 aaPredicted RBP7.95□□□□□ -1.14
HPS4-201ENST00000336873 PIPSLA2A3N6 862 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 ANTXRLA6NF34 631 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 AP2A2O94973 939 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 EBLN1P0CF75 366 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 CYP2A6P11509 494 aaPredicted RBP7.94□□□□□ -1.14
HPS4-201ENST00000336873 GGT1P19440 569 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 METAP1P53582 386 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 MAPK12P53778 367 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 HOXC5Q00444 222 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 TARDBPQ13148 414 aaKnown RBP eCLIP7.94□□□□□ -1.14
HPS4-201ENST00000336873 GRM2Q14416 872 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 KLHL12Q53G59 568 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 C9orf64Q5T6V5 341 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 CEACAM20Q6UY09 585 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.94□□□□□ -1.14
HPS4-201ENST00000336873 ZSWIM9Q86XI8 627 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 ARMC8Q8IUR7 673 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 SPARTQ8N0X7 666 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 ZCCHC10Q8TBK6 192 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 RAB2BQ8WUD1 216 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 CEP295NLQ96MC4 621 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 ANKRA2Q9H9E1 313 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 CD320Q9NPF0 282 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 TDP1Q9NUW8 608 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 SLC25A37Q9NYZ2 338 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 NEU3Q9UQ49 428 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 HCFC2Q9Y5Z7 792 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 A0A1W2PRB8 838 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 FAM220BPB1ANY3 271 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 LOC110117498-PIK3R3F6TDL0 507 aa7.94□□□□□ -1.14
HPS4-201ENST00000336873 ERN1O75460 977 aaKnown RBP7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms