RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 ARMC1Q9NVT9 282 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 ZNF451Q9Y4E5 1061 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 SNX8Q9Y5X2 465 aa12.11□□□□□ -0.47
LIMK1-201ENST00000336180 SLC16A5O15375 505 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 CREG1O75629 220 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 PLA2G16P53816 162 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 CCDC85BQ15834 202 aaPredicted RBP12.1□□□□□ -0.47
LIMK1-201ENST00000336180 COQ5Q5HYK3 327 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 COX20Q5RI15 118 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 MICU2Q8IYU8 434 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 DOK4Q8TEW6 326 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 CENPNQ96H22 339 aaPredicted RBP12.1□□□□□ -0.47
LIMK1-201ENST00000336180 MAGED4Q96JG8 741 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 FCRL4Q96PJ5 515 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 CPPED1Q9BRF8 314 aaPredicted RBP12.1□□□□□ -0.47
LIMK1-201ENST00000336180 OR52A5Q9H2C5 316 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 Q9H521 79 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 AASDHPPTQ9NRN7 309 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 PCDHB3Q9Y5E6 796 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 PLXNA2O75051 1894 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 C6orf47O95873 294 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 PTPN6P29350 595 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 DGKEP52429 567 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 PIGFQ07326 219 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 C2orf80Q0P641 193 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 SGCGQ13326 291 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 CAMK2GQ13555 558 aaPredicted RBP12.1□□□□□ -0.47
LIMK1-201ENST00000336180 PRAMEF14Q5SWL7 426 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 PRAMEF13Q5VWM6 474 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 GRHL2Q6ISB3 625 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 CACTIN-AS1Q8N1I8 211 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 TMEM132CQ8N3T6 1108 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 OR2L2Q8NH16 312 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 SLC5A11Q8WWX8 675 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 ZNF597Q96LX8 424 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 DUSP26Q9BV47 211 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 ADI1Q9BV57 179 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 VNN3Q9NY84 501 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 EXO1Q9UQ84 846 aaKnown RBP12.1□□□□□ -0.47
LIMK1-201ENST00000336180 MAP4K5Q9Y4K4 846 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 ATG2AQ2TAZ0 1938 aa12.1□□□□□ -0.47
LIMK1-201ENST00000336180 hCG_2014768A0A024R1R8 64 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 FKBP9O95302 570 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 EML2O95834 649 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 CLPTM1O96005 669 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 NADK2Q4G0N4 442 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 NHSL2Q5HYW2 709 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 TPRG1LQ5T0D9 272 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 LIPJQ5W064 366 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 FKBP9P1Q75LS8 142 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 LRRTM4Q86VH4 590 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 CHERPQ8IWX8 916 aaKnown RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 RIMKLAQ8IXN7 391 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 SHISA5Q8N114 240 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 MARVELD2Q8N4S9 558 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 CATSPER1Q8NEC5 780 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 TSPEARQ8WU66 669 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 ATL1Q8WXF7 558 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 TSACCQ96A04 125 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 INSM2Q96T92 566 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 RAB26Q9ULW5 256 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 HEMK1Q9Y5R4 338 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 PCM1Q15154 2024 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 LIN7AO14910 233 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 CLOCKO15516 846 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 MITFO75030 526 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 ADAM23O75077 832 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 HOXB2P14652 356 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 ACADLP28330 430 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 CRATP43155 626 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 ZNF658BQ4V348 819 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 TMEM259Q4ZIN3 620 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 CPTPQ5TA50 214 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 PTRH1Q86Y79 214 aaKnown RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 OR4A15Q8NGL6 344 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 NELL1Q92832 810 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 MRPL38Q96DV4 380 aaKnown RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 PHF12Q96QT6 1004 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 TRPV5Q9NQA5 729 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 RAD18Q9NS91 495 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 KLHL42Q9P2K6 505 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 MAGEL2Q9UJ55 1249 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 PAIP2BQ9ULR5 123 aaKnown RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 ABCG2Q9UNQ0 655 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 PCDHGA11Q9Y5H2 935 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 DENRO43583 198 aaKnown RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 MYO1DO94832 1006 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 TFAP2AP05549 437 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 C1GALT1C1LP0DN25 315 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 PRPS2P11908 318 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 BMP2P12643 396 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 ETFAP13804 333 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 ELK4P28324 431 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 SLC19A1P41440 591 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 CLCA4Q14CN2 919 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 TMEM52BQ4KMG9 183 aa12.09□□□□□ -0.47
LIMK1-201ENST00000336180 AASDHQ4L235 1098 aaPredicted RBP12.09□□□□□ -0.47
LIMK1-201ENST00000336180 LIN52Q52LA3 116 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms