RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 ABCB8Q9NUT2 735 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 TOR1BO14657 336 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CDRT1O95170 752 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 RNH1P13489 461 aaKnown RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 C11orf91Q3C1V1 193 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ISLR2Q6UXK2 745 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 SMIM15Q7Z3B0 74 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 TICAM1Q8IUC6 712 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 TMED9Q9BVK6 235 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 MGAT4CQ9UBM8 478 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 PRR36Q9H6K5 1346 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 COL5A2P05997 1499 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 RNF13O43567 381 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 RNASEH2AO75792 299 aaKnown RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 SLC25A14O95258 325 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 TFP02787 698 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ALDH2P05091 517 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CRADDP78560 199 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 MOGSQ13724 837 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 PEA15Q15121 130 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 TLR1Q15399 786 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 GPR162Q16538 588 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 UAP1L1Q3KQV9 507 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CLEC6AQ6EIG7 209 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CREB3L2Q70SY1 520 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 KBTBD6Q86V97 674 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 MCEMP1Q8IX19 187 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ATP6V1C2Q8NEY4 427 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CHAC2Q8WUX2 184 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 KIAA1143Q96AT1 154 aaPredicted RBP5.37□□□□□ -1.55
PTPRB-202ENST00000334414 SEZ6LQ9BYH1 1024 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CFAP97Q9P2B7 532 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 ANKMY1Q9P2S6 941 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 EXTL2Q9UBQ6 330 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 GHRLQ9UBU3 117 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 DNAJC5BQ9UF47 199 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 CA5BQ9Y2D0 317 aa5.37□□□□□ -1.55
PTPRB-202ENST00000334414 F8W036 122 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ZSCAN5DPP0CG00 497 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 RAB3BP20337 219 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF33BQ06732 778 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 KIAA1161Q6NSJ0 714 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 GTPBP8Q8N3Z3 284 aaPredicted RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 C12orf45Q8N5I9 185 aaPredicted RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 GNPDA2Q8TDQ7 276 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ADAMTS19Q8TE59 1207 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 COQ10AQ96MF6 247 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 HS6ST2Q96MM7 605 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SDHAF3Q9NRP4 125 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ABI3Q9P2A4 366 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 PSMD10O75832 226 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 RPS17P08708 135 aaKnown RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CTSHP09668 335 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 TRAPPC2P0DI81 140 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 TRAPPC2BP0DI82 140 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CHRM1P11229 460 aaPredicted RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF425Q6IV72 752 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ANKRD54Q6NXT1 300 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 MON2Q7Z3U7 1717 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 MON1AQ86VX9 555 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SLC22A15Q8IZD6 547 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 OR2T33Q8NG76 320 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ELP4Q96EB1 424 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CD180Q99467 661 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ACO2Q99798 780 aaKnown RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 MAGEH1Q9H213 219 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF175Q9Y473 711 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SLC22A31A6NKX4 558 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SPTLC1O15269 473 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ADAM12O43184 909 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 MMP10P09238 476 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 KLRC2P26717 231 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 DGKQP52824 942 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 TSPYL5Q86VY4 417 aaPredicted RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CNOT9Q92600 299 aaKnown RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SPIN2AQ99865 258 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SPIN2BQ9BPZ2 258 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ACTRT3Q9BYD9 372 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 RNF121Q9H920 327 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 TVP23BQ9NYZ1 205 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 LUZP4Q9P127 313 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 GNG8Q9UK08 70 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ASB3Q9Y575 518 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SETD1BQ9UPS6 1966 aaKnown RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 TUBAL3A6NHL2 446 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ELOA3DA6NLF2 546 aaPredicted RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SMLR1H3BR10 107 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 HRGP04196 525 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 TP53P04637 393 aaPredicted RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 GAD2Q05329 585 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 GALNT1Q10472 559 aaPredicted RBP5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CCINQ13939 588 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ELOA3BQ3SY89 546 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 NXPE1Q8N323 547 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ELOA3Q8NG57 546 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 METTL21AQ8WXB1 218 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 SUSD6Q92537 303 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 CMTM7Q96FZ5 175 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ZNF649Q9BS31 505 aa5.36□□□□□ -1.55
PTPRB-202ENST00000334414 ACTL8Q9H568 366 aa5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms