RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 WDR47O94967 919 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 PDYNP01213 254 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 CSF2P04141 144 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 PRKACAP17612 351 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 GGT2P36268 569 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 MAGEA11P43364 429 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 CLCN4P51793 760 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 CTAG1AP78358 180 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 CHRNEQ04844 493 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 RUNX1T1Q06455 604 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 ZMAT1Q5H9K5 638 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 ZNF648Q5T619 568 aaPredicted RBP13.28□□□□□ -0.28
SYNE3-201ENST00000334258 FAM151BQ6UXP7 276 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 EIF3MQ7L2H7 374 aaKnown RBP13.28□□□□□ -0.28
SYNE3-201ENST00000334258 TRIM46Q7Z4K8 759 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 ZNF280BQ86YH2 543 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 SLC5A8Q8N695 610 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 LSM14AQ8ND56 463 aaKnown RBP13.28□□□□□ -0.28
SYNE3-201ENST00000334258 SIMC1Q8NDZ2 872 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 KLHDC9Q8NEP7 349 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 RASSF5Q8WWW0 418 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 JPH3Q8WXH2 748 aaPredicted RBP13.28□□□□□ -0.28
SYNE3-201ENST00000334258 NELL1Q92832 810 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 FBXO32Q969P5 355 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 SDHCQ99643 169 aaPredicted RBP13.28□□□□□ -0.28
SYNE3-201ENST00000334258 SNTG1Q9NSN8 517 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 PPT2Q9UMR5 302 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 PCDHB5Q9Y5E4 795 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 CCDC182A6NF36 153 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 ANKRD66B4E2M5 251 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 F5H5T6 163 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 STK16O75716 305 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 KCNK5O95279 499 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 CLDN9O95484 217 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 POU1F1P28069 291 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 DDOSTP39656 456 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 GALK2Q01415 458 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 GPR50Q13585 617 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 FAHD1Q6P587 224 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 STK40Q8N2I9 435 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 FLCNQ8NFG4 579 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 WDR36Q8NI36 951 aaKnown RBP13.27□□□□□ -0.28
SYNE3-201ENST00000334258 CHAC2Q8WUX2 184 aa13.27□□□□□ -0.28
SYNE3-201ENST00000334258 TET1Q8NFU7 2136 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 H3BM21 787 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 PRLP01236 227 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 TNFRSF1BP20333 461 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 ACLYP53396 1101 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 ITGA1P56199 1179 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 SERPINA11Q86U17 422 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 NOXA1Q86UR1 476 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 SERINC5Q86VE9 423 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 FAM217AQ8IXS0 508 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 ZZZ3Q8IYH5 903 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 VANGL1Q8TAA9 524 aaPredicted RBP13.27□□□□□ -0.29
SYNE3-201ENST00000334258 GPR151Q8TDV0 419 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 TBC1D20Q96BZ9 403 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 ASPNQ9BXN1 380 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 FBXO44Q9H4M3 255 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 SMURF1Q9HCE7 757 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 TOR4AQ9NXH8 423 aa13.27□□□□□ -0.29
SYNE3-201ENST00000334258 IGLV3-10A0A075B6K4 115 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 MAGEB17A8MXT2 336 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 EBLN1P0CF75 366 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 ZNF7P17097 686 aaPredicted RBP13.26□□□□□ -0.29
SYNE3-201ENST00000334258 CTPS1P17812 591 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 DGKEP52429 567 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 ZXDBP98169 803 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 NOGQ13253 232 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 PLPP6Q8IY26 295 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 CARNMT1Q8N4J0 409 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 OR10G2Q8NGC3 310 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 MAL2Q969L2 176 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 VPS35Q96QK1 796 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 PSKH2Q96QS6 385 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 MGME1Q9BQP7 344 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 BOCQ9BWV1 1114 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 ZNF556Q9HAH1 456 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 SCML2Q9UQR0 700 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 MAN2B2Q9Y2E5 1009 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 MICAL3Q7RTP6 2002 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 OPN1SWP03999 348 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 PRPS2P11908 318 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 ITGA2P17301 1181 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 SDC1P18827 310 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 CYP2A7P20853 494 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 CD72P21854 359 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 DGKAP23743 735 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 HTR2BP41595 481 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 CASP9P55211 416 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 MXD1Q05195 221 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 TTLL9Q3SXZ7 439 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 SYT12Q8IV01 421 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 PKMYT1Q99640 499 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 CCM2Q9BSQ5 444 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 A0A1W2PQ09 198 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 HMX3A6NHT5 357 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 OR6C70A6NIJ9 312 aa13.26□□□□□ -0.29
SYNE3-201ENST00000334258 PQBP1O60828 265 aaKnown RBP13.26□□□□□ -0.29
SYNE3-201ENST00000334258 INHAP05111 366 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms