RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 hCG_2039718K7EN88 272 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 ETV6P41212 452 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF132P52740 706 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 DUSP4Q13115 394 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 Q6ZNX1 250 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 ALG3Q92685 438 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 TMEM203Q969S6 136 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 LIN28AQ9H9Z2 209 aaKnown RBP10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 HRH3Q9Y5N1 445 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 AHCTF1Q8WYP5 2266 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 KIF26BQ2KJY2 2108 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 RAD51DO75771 328 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 TFP02787 698 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 COL6A1P12109 1028 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 MMP12P39900 470 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC26A5P58743 744 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 HERV-K104P61576 105 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF616Q08AN1 781 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 CNOT9Q92600 299 aaKnown RBP10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 KCNN1Q92952 543 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 SH3YL1Q96HL8 342 aaPredicted RBP10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 PGLYRP2Q96PD5 576 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 SMCO4Q9NRQ5 59 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 MST1RQ04912 1400 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 XKP51811 444 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 PEA15Q15121 130 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 RETSATQ6NUM9 610 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 NUP54Q7Z3B4 507 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 TMBIM1Q969X1 311 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 ORAI2Q96SN7 254 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 C17orf62Q9BQA9 187 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 LRTM1Q9HBL6 345 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 SPIN1Q9Y657 262 aaPredicted RBP10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 SNCAIPQ9Y6H5 919 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 NPEPPSL1A6NEC2 478 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 CLDN4O14493 209 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 TXNL1O43396 289 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 GATCO43716 136 aaKnown RBP10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 RENP00797 406 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 TRIM46Q7Z4K8 759 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 ABHD5Q8WTS1 349 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 CHFRQ96EP1 664 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF419Q96HQ0 510 aaPredicted RBP10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 ELP3Q9H9T3 547 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 OSER1Q9NX31 292 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 SMPD4Q9NXE4 827 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 CDRT1O95170 752 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 PDGFAP04085 211 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 CTPS1P17812 591 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 METTL2BQ6P1Q9 378 aaKnown RBP10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 CANT1Q8WVQ1 401 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 PMEPA1Q969W9 287 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 METTL2AQ96IZ6 378 aaKnown RBP10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 BEX2Q9BXY8 128 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 C12orf10Q9HB07 376 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 BEX1Q9HBH7 125 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 FLVCR2Q9UPI3 526 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 SC5DO75845 299 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 OAS1P00973 400 aaKnown RBP10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 PRPS2P11908 318 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 CDK2P24941 298 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 MSX1P28360 303 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 GRK6P43250 576 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 GALK2Q01415 458 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 TLE3Q04726 772 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 Q3ZCU0 254 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 MPZL3Q6UWV2 235 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 CHDHQ8NE62 594 aaPredicted RBP10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 PIWIL1Q96J94 861 aaKnown RBP10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 SLC27A6Q9Y2P4 619 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 NPIPA5A0A0B4J1W7 369 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 BMP2P12643 396 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 NT5EP21589 574 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 EDNRAP25101 427 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 SREBF1P36956 1147 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 ERVFC1P60507 584 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 LRRC55Q6ZSA7 311 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 HEATR5AQ86XA9 2040 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 RIT1Q92963 219 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 BTBD1Q9H0C5 482 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 ZNF282Q9UDV7 671 aaPredicted RBP10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 KCNS2Q9ULS6 477 aa10.06□□□□□ -0.8
SPTBN1-201ENST00000333896 PMS2P3Q13401 168 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 SF1Q15637 639 aaKnown RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 TSTQ16762 297 aaKnown RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 PROX2Q3B8N5 592 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 FAM69AQ5T7M9 428 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 METAP1DQ6UB28 335 aaPredicted RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 LACC1Q8IV20 430 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 SKA3Q8IX90 412 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 OR2M2Q96R28 347 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 PLEKHA3Q9HB20 300 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 GPRC5CQ9NQ84 441 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 CCM2LQ9NUG4 571 aaPredicted RBP10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 PLEKHM1Q9Y4G2 1056 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 ADGRB3O60242 1522 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 CRB1P82279 1406 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 PRAMEF22A3QJZ6 481 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 CARNS1A5YM72 827 aa10.05□□□□□ -0.8
SPTBN1-201ENST00000333896 OR6C65A6NJZ3 312 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms