RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 DACH2Q96NX9 599 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 YME1L1Q96TA2 773 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 FEVQ99581 238 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 C6orf62Q9GZU0 229 aaPredicted RBP11.89□□□□□ -0.51
VPS33B-201ENST00000333371 KLHL25Q9H0H3 589 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 GIN1Q9NXP7 522 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 ZNF229Q9UJW7 825 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 OSGIN1Q9UJX0 560 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 RPS6KA6Q9UK32 745 aa11.89□□□□□ -0.51
VPS33B-201ENST00000333371 CAB39Q9Y376 341 aaPredicted RBP11.89□□□□□ -0.51
VPS33B-201ENST00000333371 UNC80Q8N2C7 3258 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 LOC100506127A0A0U1RQW1 187 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 TBX1O43435 398 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 OR56A5P0C7T3 313 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 POU2F1P14859 743 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 MAPK1P28482 360 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 GTF2E2P29084 291 aaKnown RBP11.88□□□□□ -0.51
VPS33B-201ENST00000333371 SERPINB10P48595 397 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 TRPC1P48995 793 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 CXCR4P61073 352 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 DOC2AQ14183 400 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 Q6ZNB5 142 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 GPR155Q7Z3F1 870 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 TCEAL8Q8IYN2 117 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 SYNPOQ8N3V7 929 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 C1orf52Q8N6N3 182 aaKnown RBP11.88□□□□□ -0.51
VPS33B-201ENST00000333371 CHST14Q8NCH0 376 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 OR4K1Q8NGD4 311 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 PHF10Q8WUB8 498 aaKnown RBP11.88□□□□□ -0.51
VPS33B-201ENST00000333371 ELMO1Q92556 727 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 ZNF689Q96CS4 500 aaPredicted RBP11.88□□□□□ -0.51
VPS33B-201ENST00000333371 SCRN2Q96FV2 425 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 SIGLEC11Q96RL6 698 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 DUSP26Q9BV47 211 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 ABCB8Q9NUT2 735 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 GPR83Q9NYM4 423 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 VPS29Q9UBQ0 182 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 B4GALT6Q9UBX8 382 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 J3KTA2 159 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 AIREO43918 545 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 SOCS5O75159 536 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 CNOT3O75175 753 aaKnown RBP11.88□□□□□ -0.51
VPS33B-201ENST00000333371 C9P02748 559 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 DNTTP04053 509 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 CKMP06732 381 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 CBSLP0DN79 551 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 JUPP14923 745 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 PRPH2P23942 346 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 CBSP35520 551 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 PREPP48147 710 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 PROX2Q3B8N5 592 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.88□□□□□ -0.51
VPS33B-201ENST00000333371 FAM180BQ6P0A1 224 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 P3H2Q8IVL5 708 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 NLGN4XQ8N0W4 816 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 CBARPQ8N350 705 aaPredicted RBP11.88□□□□□ -0.51
VPS33B-201ENST00000333371 SVOPQ8N4V2 548 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 SLC5A8Q8N695 610 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 CFAP97Q9P2B7 532 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 LSM7Q9UK45 103 aaKnown RBP11.88□□□□□ -0.51
VPS33B-201ENST00000333371 ERVW-1Q9UQF0 538 aa11.88□□□□□ -0.51
VPS33B-201ENST00000333371 COL4A6Q14031 1691 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 PABPN1LA6NDY0 278 aaKnown RBP11.87□□□□□ -0.51
VPS33B-201ENST00000333371 TEX28O15482 410 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 LATS1O95835 1130 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 SPNP16150 400 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 MNX1P50219 401 aaPredicted RBP11.87□□□□□ -0.51
VPS33B-201ENST00000333371 RAE1P78406 368 aaKnown RBP11.87□□□□□ -0.51
VPS33B-201ENST00000333371 ACSM2AQ08AH3 577 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 NAE1Q13564 534 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 CKAP5Q14008 2032 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 POM121L1PQ3SYA9 428 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 ACSM2BQ68CK6 577 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 METTL2BQ6P1Q9 378 aaKnown RBP11.87□□□□□ -0.51
VPS33B-201ENST00000333371 DPY19L3Q6ZPD9 716 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 RHOXF1Q8NHV9 184 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 CSGALNACT1Q8TDX6 532 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 TBC1D20Q96BZ9 403 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 NIPSNAP1Q9BPW8 284 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 ITPAQ9BY32 194 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 SUV39H2Q9H5I1 410 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 QPCTLQ9NXS2 382 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 SH3BP4Q9P0V3 963 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 ACSL6Q9UKU0 697 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 TMED5Q9Y3A6 229 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 PCDHB11Q9Y5F2 797 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 HSPE1-MOB4S4R3N1 261 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 PRAMEF25A6NGN4 478 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 ARHGEF33A8MVX0 844 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 GFYI3L273 518 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 SAP18O00422 153 aaKnown RBP11.87□□□□□ -0.51
VPS33B-201ENST00000333371 NUAK1O60285 661 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 RFPL2O75678 378 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 C8GP07360 202 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 STSP08842 583 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 ETFAP13804 333 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 ATP1B2P14415 290 aaPredicted RBP11.87□□□□□ -0.51
VPS33B-201ENST00000333371 CSF2RAP15509 400 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 GABRR2P28476 465 aa11.87□□□□□ -0.51
VPS33B-201ENST00000333371 EIF2DP41214 584 aaKnown RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms