RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 RPS13P62277 151 aaKnown RBP12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 IFITM3Q01628 133 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 MC1RQ01726 317 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 CSTF3Q12996 717 aaKnown RBP12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 TSTA3Q13630 321 aaPredicted RBP12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 KEAP1Q14145 624 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 CLCA4Q14CN2 919 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 RGNQ15493 299 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 DEFB115Q30KQ5 88 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 CATSPEREQ5SY80 951 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 CPTPQ5TA50 214 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 GPR153Q6NV75 609 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 FAM180BQ6P0A1 224 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 MSANTD1Q6ZTZ1 278 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 ANKRD33Q7Z3H0 272 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 TRIM74Q86UV6 250 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 ELMOD1Q8N336 334 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 TMCO5AQ8N6Q1 288 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 FAM120CQ9NX05 1096 aaKnown RBP12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 KIF17Q9P2E2 1029 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 RPS6KA6Q9UK32 745 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 NOTCH4Q99466 2003 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 GABARAPO95166 117 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 ZNF12P17014 697 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 POLR2LP62875 67 aaKnown RBP12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 NPRL3Q12980 569 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 LY6G5CQ5SRR4 150 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 EGFLAMQ63HQ2 1017 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 LILRA6Q6PI73 481 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 ANGPTL8Q6UXH0 198 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 AHSA2Q719I0 299 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 CHPT1Q8WUD6 406 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 CLP1Q92989 425 aaKnown RBP12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 GLMNQ92990 594 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 YIPF6Q96EC8 236 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 KCNC2Q96PR1 638 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 REEP1Q9H902 201 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 RLIMQ9NVW2 624 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 CCDC88CQ9P219 2028 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 HELZP42694 1942 aaKnown RBP12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 GNG14A0A1W2PPG7 69 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 FGF18O76093 207 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 RRM2P31350 389 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 VIPR1P32241 457 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 MEF2AQ02078 507 aaPredicted RBP12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 KIAA1614Q5VZ46 1190 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 ENTHD1Q8IYW4 607 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 SETD9Q8NE22 299 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 OR52J3Q8NH60 311 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 DNASE1L2Q92874 299 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 ACOT13Q9NPJ3 140 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 SELENONQ9NZV5 590 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 PNMA8BQ9ULN7 279 aaPredicted RBP12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 TESMINQ9Y4I5 508 aa12.93□□□□□ -0.34
TUBA1B-201ENST00000332858 PRAMEF25A6NGN4 478 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 H0YIV9 168 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 C21orf33P30042 268 aaPredicted RBP12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 MVDP53602 400 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 ITGA1P56199 1179 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 CD300CQ08708 224 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 CAMK2GQ13555 558 aaPredicted RBP12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 TEAD2Q15562 447 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 SYTL3Q4VX76 610 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 PERM1Q5SV97 790 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 ZDHHC20Q5W0Z9 365 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 FAHD1Q6P587 224 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 KREMEN2Q8NCW0 462 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 IRF7Q92985 503 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 TMEM159Q96B96 161 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 ZNF347Q96SE7 839 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 EMILIN2Q9BXX0 1053 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 ZBP1Q9H171 429 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 ACSL6Q9UKU0 697 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 TPRKBQ9Y3C4 175 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 TRIM17Q9Y577 477 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 FAM20BO75063 409 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 ACRP10323 421 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 ETFAP13804 333 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 LAG3P18627 525 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 HBA1P69905 142 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 TMEM115Q12893 351 aaPredicted RBP12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 PRSS53Q2L4Q9 553 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 PRSS36Q5K4E3 855 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 GRHL2Q6ISB3 625 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 TMEM220Q6QAJ8 160 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 TMPRSS11BQ86T26 416 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 TSPYL5Q86VY4 417 aaPredicted RBP12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 CHTF18Q8WVB6 975 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 BTN2A2Q8WVV5 523 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 CIDECQ96AQ7 238 aaPredicted RBP12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 ERLEC1Q96DZ1 483 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 MRGPRX3Q96LB0 322 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 ZNF300Q96RE9 604 aaPredicted RBP12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 NRTNQ99748 197 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 HEPHQ9BQS7 1158 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 CEP44Q9C0F1 390 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 ASAH2Q9NR71 780 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 ERVW-1Q9UQF0 538 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 PCDHGA6Q9Y5G7 932 aa12.92□□□□□ -0.34
TUBA1B-201ENST00000332858 PRMT3O60678 531 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms