RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 IL6P05231 212 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 PCSK1P29120 753 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 GZMKP49863 264 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 HMGCS1Q01581 520 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 RUNX1T1Q06455 604 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 KIAA0040Q15053 153 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 C18orf21Q32NC0 220 aaPredicted RBP17.55■□□□□ 0.4
PKP3-201ENST00000331563 PIK3R6Q5UE93 754 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 FAM131AQ6UXB0 335 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 LAX1Q8IWV1 398 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 ENKURQ8TC29 256 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 UTP15Q8TED0 518 aaKnown RBP17.55■□□□□ 0.4
PKP3-201ENST00000331563 MSANTD3Q96H12 275 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 PPP3R2Q96LZ3 170 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 MCCC1Q96RQ3 725 aaPredicted RBP17.55■□□□□ 0.4
PKP3-201ENST00000331563 ZNF451Q9Y4E5 1061 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 FAM25EA8MYX2 175 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 J3KR12 359 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 PI15O43692 258 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 FHP07954 510 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 ZNF250P15622 560 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 DDCP20711 480 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 STC1P52823 247 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 VLDLRP98155 873 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 ZNF33BQ06732 778 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 QPRTQ15274 297 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 C10orf62Q5T681 223 aaPredicted RBP17.55■□□□□ 0.4
PKP3-201ENST00000331563 METTL23Q86XA0 190 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 VWA5B2Q8N398 1253 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 SERHL2Q9H4I8 314 aa17.55■□□□□ 0.4
PKP3-201ENST00000331563 FGF10O15520 208 aaPredicted RBP17.54■□□□□ 0.4
PKP3-201ENST00000331563 SGTAO43765 313 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 ZNF254O75437 659 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 TNFRSF21O75509 655 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 ZNF30P17039 623 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 CSTF2P33240 577 aaKnown RBP eCLIP17.54■□□□□ 0.4
PKP3-201ENST00000331563 MAGEA2P43356 314 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 HK3P52790 923 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 SLC39A12Q504Y0 691 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 IGSF11Q5DX21 431 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 PDZK1Q5T2W1 519 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 TCTE3Q8IZS6 198 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 TMEM132CQ8N3T6 1108 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 TTC9BQ8N6N2 239 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 TPD52L3Q96J77 140 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 FAM83DQ9H4H8 585 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 IFT22Q9H7X7 185 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 RNF121Q9H920 327 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 SNTG1Q9NSN8 517 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 C5orf42Q9H799 3197 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 RPP40O75818 363 aaKnown RBP17.54■□□□□ 0.4
PKP3-201ENST00000331563 IFNA16P05015 189 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 ACADMP11310 421 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 HOXB6P17509 224 aaKnown RBP17.54■□□□□ 0.4
PKP3-201ENST00000331563 CST5P28325 142 aaPredicted RBP17.54■□□□□ 0.4
PKP3-201ENST00000331563 GRK4P32298 578 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 PTPRNQ16849 979 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 ZNF648Q5T619 568 aaPredicted RBP17.54■□□□□ 0.4
PKP3-201ENST00000331563 NLRP8Q86W28 1048 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 NKAPQ8N5F7 415 aaKnown RBP17.54■□□□□ 0.4
PKP3-201ENST00000331563 ZNF557Q8N988 423 aaPredicted RBP17.54■□□□□ 0.4
PKP3-201ENST00000331563 SIDT2Q8NBJ9 832 aaKnown RBP17.54■□□□□ 0.4
PKP3-201ENST00000331563 LINGO1Q96FE5 620 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 ASPNQ9BXN1 380 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 HDHD5Q9BXW7 423 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 SP110Q9HB58 689 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 STOML2Q9UJZ1 356 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 KLK4Q9Y5K2 254 aa17.54■□□□□ 0.4
PKP3-201ENST00000331563 B4DXG7 233 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 H3BM21 787 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 CCNDBP1O95273 360 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 HYAL2Q12891 473 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 GALEQ14376 348 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 GARNL3Q5VVW2 1013 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 ZSWIM9Q86XI8 627 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 KRT73Q86Y46 540 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 EFHBQ8N7U6 833 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 VANGL1Q8TAA9 524 aaPredicted RBP17.53■□□□□ 0.4
PKP3-201ENST00000331563 EEF1AKMT1Q8WVE0 214 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 HHIPL1Q96JK4 782 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 HRASLS5Q96KN8 279 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 MGLLQ99685 303 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 C11orf54Q9H0W9 315 aaPredicted RBP17.53■□□□□ 0.4
PKP3-201ENST00000331563 ATP13A1Q9HD20 1204 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 NOSIPQ9Y314 301 aaKnown RBP17.53■□□□□ 0.4
PKP3-201ENST00000331563 LINC00862A6NCI5 91 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 SMLR1H3BR10 107 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 ATG13O75143 517 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 CSTF3Q12996 717 aaKnown RBP17.53■□□□□ 0.4
PKP3-201ENST00000331563 RAB41Q5JT25 222 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 DOK6Q6PKX4 331 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 GLB1LQ6UWU2 654 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 OR8H1Q8NGG4 311 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 OR5M11Q96RB7 305 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 PITX2Q99697 317 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 ACBD6Q9BR61 282 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 TTLL2Q9BWV7 592 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 C3orf14Q9HBI5 128 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 IMPAD1Q9NX62 359 aa17.53■□□□□ 0.4
PKP3-201ENST00000331563 DIMT1Q9UNQ2 313 aaKnown RBP17.53■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms