RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 CHST10O43529 356 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 ELFN1P0C7U0 828 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 PTX3P26022 381 aaPredicted RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 GMFBP60983 142 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 DEFA5Q01523 94 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 GALNT1Q10472 559 aaPredicted RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 GRIK2Q13002 908 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 SERINC3Q13530 473 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 EXOC3L2Q2M3D2 409 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 PGBD2Q6P3X8 592 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 SLC5A8Q8N695 610 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 GEMIN6Q8WXD5 167 aaKnown RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 TSPAN18Q96SJ8 248 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 UCK2Q9BZX2 261 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 ZCCHC3Q9NUD5 404 aaKnown RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 UGT2A1Q9Y4X1 527 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 SPACA6W5XKT8 324 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 IGKV6-21A0A0C4DH24 114 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 C6orf47O95873 294 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 PDYNP01213 254 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 HLA-DQA2P01906 255 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 FGF4P08620 206 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 RYKP34925 604 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 MAP2K5Q13163 448 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 BCL7AQ4VC05 210 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 SHQ1Q6PI26 577 aaKnown RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 Q8N402 240 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 LSM14AQ8ND56 463 aaKnown RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 OR6C4Q8NGE1 309 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 PROKR1Q8TCW9 393 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 EFHD2Q96C19 240 aaPredicted RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 GPN2Q9H9Y4 310 aaPredicted RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 HSFX1Q9UBD0 423 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 AGAP5A6NIR3 686 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 PLD2O14939 933 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 KLK1P06870 262 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 H1F0P07305 194 aaKnown RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 HOXA11P31270 313 aaPredicted RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 MAP2K3P46734 347 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 PPIGQ13427 754 aaKnown RBP eCLIP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 COQ5Q5HYK3 327 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 PRSS55Q6UWB4 352 aaPredicted RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 CEACAM20Q6UY09 585 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 LHFPL3Q86UP9 236 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 IQCHQ86VS3 1027 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 NPAS3Q8IXF0 933 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 PAPD5Q8NDF8 572 aaKnown RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 TEPSINQ96N21 525 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 CXCL16Q9H2A7 254 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 HCN2Q9UL51 889 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 ITM2BQ9Y287 266 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 C2orf92A0A1B0GVN3 265 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 UBFD1O14562 309 aaKnown RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 PQBP1O60828 265 aaKnown RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 CAPN15O75808 1086 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 PFKLP17858 780 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 SLC9A5Q14940 896 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 KLHL22Q53GT1 634 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 ATAT1Q5SQI0 421 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 FAM180BQ6P0A1 224 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 ZMIZ2Q8NF64 920 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 WDR48Q8TAF3 677 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 WRAP53Q9BUR4 548 aaKnown RBP13.6□□□□□ -0.23
EPHB3-201ENST00000330394 SEC14L4Q9UDX3 406 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 ACSL6Q9UKU0 697 aa13.6□□□□□ -0.23
EPHB3-201ENST00000330394 OR6C75A6NL08 312 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 NFKBIEO00221 500 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 GABRR2P28476 465 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 AVPR1BP47901 424 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 INHBEP58166 350 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 SCAPQ12770 1279 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 LINGO2Q7L985 606 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 ADGRD2Q7Z7M1 963 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 RNF130Q86XS8 419 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 ALDH16A1Q8IZ83 802 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 ARL14EPQ8N8R7 260 aaPredicted RBP13.59□□□□□ -0.23
EPHB3-201ENST00000330394 FAM98AQ8NCA5 519 aaKnown RBP13.59□□□□□ -0.23
EPHB3-201ENST00000330394 ADAMTS15Q8TE58 950 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 JPH3Q8WXH2 748 aaPredicted RBP13.59□□□□□ -0.23
EPHB3-201ENST00000330394 MAGEB10Q96LZ2 347 aaPredicted RBP13.59□□□□□ -0.23
EPHB3-201ENST00000330394 IGKV6D-21A0A0A0MT36 114 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 STATHP02808 62 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 PIGAP37287 484 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 OMPP47874 163 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 GHRHRQ02643 423 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 MLLT1Q03111 559 aaPredicted RBP13.59□□□□□ -0.23
EPHB3-201ENST00000330394 ARHGAP15Q53QZ3 475 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 PNCKQ6P2M8 343 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 FAM92BQ6ZTR7 304 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 FAM83FQ8NEG4 500 aaPredicted RBP13.59□□□□□ -0.23
EPHB3-201ENST00000330394 AKAP1Q92667 903 aaKnown RBP eCLIP13.59□□□□□ -0.23
EPHB3-201ENST00000330394 UPF1Q92900 1129 aaKnown RBP eCLIP13.59□□□□□ -0.23
EPHB3-201ENST00000330394 AP2M1Q96CW1 435 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 NLE1Q9NVX2 485 aaPredicted RBP13.59□□□□□ -0.23
EPHB3-201ENST00000330394 CFAP97Q9P2B7 532 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 TJP1Q07157 1748 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 FAM86C2PA6NEL3 165 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 COQ9O75208 318 aa13.59□□□□□ -0.23
EPHB3-201ENST00000330394 IFNA7P01567 189 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms