RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 COPG1Q9Y678 874 aaKnown RBP15.8■□□□□ 0.12
PDLIM1-201ENST00000329399 KCNE2Q9Y6J6 123 aa15.8■□□□□ 0.12
PDLIM1-201ENST00000329399 BBIP1A8MTZ0 92 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 CDRT15L2A8MXV6 281 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 PSMD12O00232 456 aaPredicted RBP15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 SLC35G4P0C7Q5 338 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 GNAZP19086 355 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 EIF2S3P41091 472 aaKnown RBP15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 HALP42357 657 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 PPM1FP49593 454 aaPredicted RBP15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 EPHA4P54764 986 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 FOXA1P55317 472 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 EMX2Q04743 252 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 E2F2Q14209 437 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 THOC6Q86W42 341 aaKnown RBP15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 MIER2Q8N344 545 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 OR5K2Q8NHB8 316 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 TFGQ92734 400 aaPredicted RBP15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 FGF11Q92914 225 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 USP7Q93009 1102 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 CRELD1Q96HD1 420 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 CATSPER2Q96P56 530 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 PKP4Q99569 1192 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 SLC25A23Q9BV35 468 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 RAB11FIP5Q9BXF6 653 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 TRIT1Q9H3H1 467 aaKnown RBP15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 EFCAB1Q9HAE3 211 aa15.79■□□□□ 0.12
PDLIM1-201ENST00000329399 GSC2O15499 205 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 DUX1O43812 170 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 KRT16P08779 473 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 LINC00032P0C843 101 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 HSD3B1P14060 373 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 ACPPP15309 386 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 HSD3B2P26439 372 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 PRDX3P30048 256 aaKnown RBP15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 GDF5P43026 501 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 MXRA7P84157 204 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 RIPK1Q13546 671 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 LAPTM5Q13571 262 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 RPS6KA2Q15349 733 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 C18orf21Q32NC0 220 aaPredicted RBP15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 FBXO48Q5FWF7 155 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 C19orf48Q6RUI8 117 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 REPS1Q96D71 796 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 RNF31Q96EP0 1072 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 PPP1R36Q96LQ0 422 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 C3orf30Q96M34 536 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 PPM1MQ96MI6 270 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 DCBLD2Q96PD2 775 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 TGM7Q96PF1 710 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 HAUS8Q9BT25 410 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 STRADBQ9C0K7 418 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 SDR39U1Q9NRG7 319 aaPredicted RBP15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 ASIC5Q9NY37 505 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 FOXJ2Q9P0K8 574 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 SLC22A14Q9Y267 594 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 ASF1AQ9Y294 204 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 TIMM22Q9Y584 194 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 IGSF10Q6WRI0 2623 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 C9orf172C9J069 976 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 CAPN5O15484 640 aaPredicted RBP15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 SLC16A8O95907 504 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 AMD1P17707 334 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 PRPH2P23942 346 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 NDUFS1P28331 727 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 IMPA1P29218 277 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 SLC5A2P31639 672 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 PRKG2Q13237 762 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 CLPPQ16740 277 aaPredicted RBP15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 PDCD4Q53EL6 469 aaKnown RBP15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 COQ5Q5HYK3 327 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 IGF2-ASQ6U949 168 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 C16orf89Q6UX73 402 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 WDR34Q96EX3 536 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 KCNA7Q96RP8 456 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 SGPP1Q9BX95 441 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 BRINP2Q9C0B6 783 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 MVB12BQ9H7P6 319 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 ZIM2Q9NZV7 527 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 TMED5Q9Y3A6 229 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 PCDHGA11Q9Y5H2 935 aa15.78■□□□□ 0.12
PDLIM1-201ENST00000329399 A0A1B0GTL3 188 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 H0YIV9 168 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 TMX2-CTNND1H3BSU7 103 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 MANBAO00462 879 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 PRAMEF10O60809 474 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 RASSF9O75901 435 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 WFS1O76024 890 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 C9P02748 559 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 SNRPB2P08579 225 aaKnown RBP15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 ERGP11308 486 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 RBMS1P29558 406 aaKnown RBP15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 MAPK10P53779 464 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 IRF8Q02556 426 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 NAE1Q13564 534 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 FASTKQ14296 549 aaKnown RBP15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 PAGE2BQ5JRK9 111 aa15.77■□□□□ 0.11
PDLIM1-201ENST00000329399 C6orf136Q5SQH8 315 aa15.77■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms