RNA–Protein interactions for RNA: ENST00000326656.12

PTPMT1-201, Transcript of protein tyrosine phosphatase, mitochondrial 1, humanhuman

TSL 1 (best) BASIC

Gene PTPMT1, Length 928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPMT1-201ENST00000326656 SNX12Q9UMY4 172 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 PCDHGB6Q9Y5F9 930 aa16.73■□□□□ 0.27
PTPMT1-201ENST00000326656 PABPN1LA6NDY0 278 aaKnown RBP16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 PRAMEF2O60811 474 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 WDPCPO95876 746 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 ITGAMP11215 1152 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 XCR1P46094 333 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 CCR8P51685 355 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 DHX9Q08211 1270 aaKnown RBP16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 PWP1Q13610 501 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 HERC3Q15034 1050 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 ZRSR2Q15696 482 aaKnown RBP16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 EXT1Q16394 746 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 MINDY4Q4G0A6 757 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 HIBCHQ6NVY1 386 aaPredicted RBP16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 STRA8Q7Z7C7 330 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 TBC1D19Q8N5T2 526 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 CERS2Q96G23 380 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 PDLIM5Q96HC4 596 aaKnown RBP16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 ZNF354BQ96LW1 612 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 MAGEB10Q96LZ2 347 aaPredicted RBP16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 OR1F2PQ96R84 312 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 ATG10Q9H0Y0 220 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 CLK4Q9HAZ1 481 aaKnown RBP16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 ASIC3Q9UHC3 531 aa16.72■□□□□ 0.27
PTPMT1-201ENST00000326656 SCN3AQ9NY46 2000 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 LCMT2O60294 686 aaKnown RBP16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 RASAL1O95294 804 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 TSPAN12O95859 305 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 ENO2P09104 434 aaPredicted RBP16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 COL8A1P27658 744 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 TDGF1P3P51864 188 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 EFNA3P52797 238 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 CDKN2DP55273 166 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 PHKG1Q16816 387 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 MFSD4BQ5TF39 518 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 SYDE1Q6ZW31 735 aaPredicted RBP16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 SLC26A11Q86WA9 606 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 PDIK1LQ8N165 341 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 SLC35F6Q8N357 371 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 KCT2Q8NC54 265 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 PLPP5Q8NEB5 264 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 OR56A3Q8NH54 315 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 M1APQ8TC57 530 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 LRRC39Q96DD0 335 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 LINGO1Q96FE5 620 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 SNF8Q96H20 258 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 ARL15Q9NXU5 204 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 VWA7Q9Y334 891 aa16.71■□□□□ 0.27
PTPMT1-201ENST00000326656 TRBC2A0A5B9 178 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 SGK494L7N484 410 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 CELA2AP08217 269 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 CDH1P12830 882 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 TCP1P17987 556 aaKnown RBP16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 IL1RNP18510 177 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 ZNF33BQ06732 778 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 PDAP1Q13442 181 aaKnown RBP16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 FRG1Q14331 258 aaKnown RBP16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 MORF4L2Q15014 288 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 BTBD16Q32M84 506 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 RBM20Q5T481 1227 aaKnown RBP16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 TEDDM1Q5T9Z0 273 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 ZNF787Q6DD87 383 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 PRSS41Q7RTY9 318 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 ANKRD37Q7Z713 158 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 AFAP1L2Q8N4X5 818 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 ANKRD7Q92527 254 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 MMP25Q9NPA2 562 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 NAALAD2Q9Y3Q0 740 aa16.7■□□□□ 0.26
PTPMT1-201ENST00000326656 FEZF1A0PJY2 475 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 A8MUI8 341 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 MAGEB17A8MXT2 336 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 SEC24DO94855 1032 aaPredicted RBP16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 IVDP26440 423 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 AHRP35869 848 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 SNRPNP63162 240 aaKnown RBP16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 MEF2AQ02078 507 aaPredicted RBP16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 ILF2Q12905 390 aaKnown RBP16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 NSDHLQ15738 373 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 MSS51Q4VC12 460 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 ACER2Q5QJU3 275 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 MTFR2Q6P444 385 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 MBOAT1Q6ZNC8 495 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 PDSS2Q86YH6 399 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 SPNS2Q8IVW8 549 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 LGI4Q8N135 537 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 FBXL8Q96CD0 374 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 RUNDC3BQ96NL0 473 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 LPAR4Q99677 370 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 MACROD1Q9BQ69 325 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 DDX47Q9H0S4 455 aaKnown RBP16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 PPANQ9NQ55 473 aaKnown RBP16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 HCN3Q9P1Z3 774 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 SH2B3Q9UQQ2 575 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 ENTPD4Q9Y227 616 aa16.69■□□□□ 0.26
PTPMT1-201ENST00000326656 OR1F1O43749 312 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 STATHP02808 62 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 JAK1P23458 1154 aa16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 ACTN3Q08043 901 aaPredicted RBP16.68■□□□□ 0.26
PTPMT1-201ENST00000326656 MEP1AQ16819 746 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 177.7 ms