RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 BTN3A3O00478 584 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 UBXN7O94888 489 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 PROS1P07225 676 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 GIMD1P0DJR0 217 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 GLB1P16278 677 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 AHRP35869 848 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 CSNK1G2P78368 415 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 BNIP3Q12983 259 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 KLF10Q13118 480 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 SLCO6A1Q86UG4 719 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 SLC25A45Q8N413 288 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 TRPV3Q8NET8 790 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 OR10G6Q8NH81 332 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 RP9Q8TA86 221 aaKnown RBP17.29■□□□□ 0.36
SYNE4-201ENST00000324444 GATA6Q92908 595 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 PRAP1Q96NZ9 151 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 TMEM121BQ9BXQ6 578 aaPredicted RBP17.29■□□□□ 0.36
SYNE4-201ENST00000324444 ACPTQ9BZG2 426 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 ZNF385DQ9H6B1 395 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 AIG1Q9NVV5 245 aa17.29■□□□□ 0.36
SYNE4-201ENST00000324444 RUVBL1Q9Y265 456 aaKnown RBP17.29■□□□□ 0.36
SYNE4-201ENST00000324444 COPG1Q9Y678 874 aaKnown RBP17.29■□□□□ 0.36
SYNE4-201ENST00000324444 DYTNA2CJ06 578 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 PSMD12O00232 456 aaPredicted RBP17.28■□□□□ 0.36
SYNE4-201ENST00000324444 TNFSF14O43557 240 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 UNC5CO95185 931 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 POLR2CP19387 275 aaPredicted RBP17.28■□□□□ 0.36
SYNE4-201ENST00000324444 PSMB5P28074 263 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 ARFIP1P53367 373 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 RPS15AP62244 130 aaKnown RBP17.28■□□□□ 0.36
SYNE4-201ENST00000324444 CUL3Q13618 768 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 DDX39BQ13838 428 aaKnown RBP17.28■□□□□ 0.36
SYNE4-201ENST00000324444 PDCD4Q53EL6 469 aaKnown RBP17.28■□□□□ 0.36
SYNE4-201ENST00000324444 SPESP1Q6UW49 350 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 GATAD2AQ86YP4 633 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 CARFQ8N187 725 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 OR2T11Q8NH01 316 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 SAP25Q8TEE9 199 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 TSPEARQ8WU66 669 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 ADAMTS14Q8WXS8 1223 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 OR2A14Q96R47 310 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 DPH7Q9BTV6 452 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 BRINP2Q9C0B6 783 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 RAB33BQ9H082 229 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 SDR39U1Q9NRG7 319 aaPredicted RBP17.28■□□□□ 0.36
SYNE4-201ENST00000324444 FARSBQ9NSD9 589 aaKnown RBP17.28■□□□□ 0.36
SYNE4-201ENST00000324444 SPHK1Q9NYA1 384 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 ZIM2Q9NZV7 527 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 ARMCX1Q9P291 453 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 SLC12A4Q9UP95 1085 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 MSRB2Q9Y3D2 182 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 PTGDR2Q9Y5Y4 395 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 A0A0J9YY10 115 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 MAP3K7O43318 606 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 OR1F1O43749 312 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 CLEC3AO75596 197 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 SEMA3DO95025 777 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 PNLIPP16233 465 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 UGT2B7P16662 529 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 PEBP1P30086 187 aaKnown RBP17.28■□□□□ 0.36
SYNE4-201ENST00000324444 NEK2P51955 445 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 MAZP56270 477 aaKnown RBP17.28■□□□□ 0.36
SYNE4-201ENST00000324444 ACSM2AQ08AH3 577 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 STX5Q13190 355 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 UBAP2LQ14157 1087 aaKnown RBP17.28■□□□□ 0.36
SYNE4-201ENST00000324444 TMEM198Q66K66 360 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 ACSM2BQ68CK6 577 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 ZNF425Q6IV72 752 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 SFTPA2Q8IWL1 248 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 STARD8Q92502 1023 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 QRFPRQ96P65 431 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 CD180Q99467 661 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 MTERF1Q99551 399 aaKnown RBP17.28■□□□□ 0.36
SYNE4-201ENST00000324444 ZBTB18Q99592 522 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 DMRT3Q9NQL9 472 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 CUEDC1Q9NWM3 386 aaPredicted RBP17.28■□□□□ 0.36
SYNE4-201ENST00000324444 SIRT5Q9NXA8 310 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 LRIT1Q9P2V4 623 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 SH2B3Q9UQQ2 575 aa17.28■□□□□ 0.36
SYNE4-201ENST00000324444 MAGEB17A8MXT2 336 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 PPM1DO15297 605 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 PIK3R1P27986 724 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 SCTRP47872 440 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 RPL38P63173 70 aaKnown RBP17.27■□□□□ 0.35
SYNE4-201ENST00000324444 GPLD1P80108 840 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 HMGCS1Q01581 520 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 CYLC2Q14093 348 aaPredicted RBP17.27■□□□□ 0.35
SYNE4-201ENST00000324444 TMEM35AQ53FP2 167 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 IL23RQ5VWK5 629 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 PAGE2Q7Z2X7 111 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 FAM181AQ8N9Y4 354 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 GLB1L3Q8NCI6 653 aaPredicted RBP17.27■□□□□ 0.35
SYNE4-201ENST00000324444 SRFBP1Q8NEF9 429 aaKnown RBP17.27■□□□□ 0.35
SYNE4-201ENST00000324444 OR4C6Q8NH72 309 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 ZDHHC12Q96GR4 267 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 AHCYL2Q96HN2 611 aaKnown RBP17.27■□□□□ 0.35
SYNE4-201ENST00000324444 HBEGFQ99075 208 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.27■□□□□ 0.35
SYNE4-201ENST00000324444 TOR4AQ9NXH8 423 aa17.27■□□□□ 0.35
SYNE4-201ENST00000324444 NDE1Q9NXR1 346 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms