RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 KLHL35Q6PF15 583 aa21.53■■□□□ 1.04
PNKP-201ENST00000322344 LAS2Q8IYD9 372 aa21.53■■□□□ 1.04
PNKP-201ENST00000322344 KIAA1958Q8N8K9 716 aa21.53■■□□□ 1.04
PNKP-201ENST00000322344 FNDC8Q8TC99 324 aa21.53■■□□□ 1.04
PNKP-201ENST00000322344 POF1BQ8WVV4 589 aa21.53■■□□□ 1.04
PNKP-201ENST00000322344 SGPP1Q9BX95 441 aa21.53■■□□□ 1.04
PNKP-201ENST00000322344 REEP4Q9H6H4 257 aa21.53■■□□□ 1.04
PNKP-201ENST00000322344 ITM2CQ9NQX7 267 aa21.53■■□□□ 1.04
PNKP-201ENST00000322344 ATAD3AQ9NVI7 634 aa21.53■■□□□ 1.04
PNKP-201ENST00000322344 GMPPBQ9Y5P6 360 aa21.53■■□□□ 1.04
PNKP-201ENST00000322344 SUV39H1O43463 412 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 LILRB5O75023 590 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 C1GALT1C1LP0DN25 315 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 PCMT1P22061 227 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 CLK3P49761 638 aaKnown RBP21.52■■□□□ 1.04
PNKP-201ENST00000322344 ADNP2Q6IQ32 1131 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 PDE12Q6L8Q7 609 aaKnown RBP21.52■■□□□ 1.04
PNKP-201ENST00000322344 CFAP206Q8IYR0 622 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 C11orf65Q8NCR3 313 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 GPR156Q8NFN8 814 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 VN1R2Q8NFZ6 395 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 OR4A15Q8NGL6 344 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 OR9A1PQ8NGU1 263 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 GOT1L1Q8NHS2 421 aaPredicted RBP21.52■■□□□ 1.04
PNKP-201ENST00000322344 CNIH3Q8TBE1 160 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 PAWRQ96IZ0 340 aaKnown RBP21.52■■□□□ 1.04
PNKP-201ENST00000322344 ZNF514Q96K75 400 aaPredicted RBP21.52■■□□□ 1.04
PNKP-201ENST00000322344 EPYCQ99645 322 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 BCL7BQ9BQE9 202 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 PREBQ9HCU5 417 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 SCN3BQ9NY72 215 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 SH3BP4Q9P0V3 963 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 KIF17Q9P2E2 1029 aa21.52■■□□□ 1.04
PNKP-201ENST00000322344 WARS2Q9UGM6 360 aaKnown RBP21.52■■□□□ 1.04
PNKP-201ENST00000322344 PTGES3LE9PB15 166 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 MRPS14O60783 128 aaKnown RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 ADH1CP00326 375 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 SOD1P00441 154 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 C9P02748 559 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 NPPBP16860 134 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 CD247P20963 164 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 ITGB7P26010 798 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 SIM2Q14190 667 aaPredicted RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 GRASPQ7Z6J2 395 aaPredicted RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 ZC3H7AQ8IWR0 971 aaKnown RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 CELF5Q8N6W0 485 aaKnown RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 ZNF366Q8N895 744 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 TTC29Q8NA56 475 aaPredicted RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 DRAXINQ8NBI3 349 aaPredicted RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 TMIEQ8NEW7 156 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 SP7Q8TDD2 431 aaPredicted RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 NUS1Q96E22 293 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 KRT84Q9NSB2 600 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 TBC1D23Q9NUY8 699 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 PAK1IP1Q9NWT1 392 aaPredicted RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 GULP1Q9UBP9 304 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 ZNF99A8MXY4 864 aaPredicted RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 INHBBP09529 407 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 ZNF182P17025 639 aaPredicted RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 CEBPBP17676 345 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 IL1RL1Q01638 556 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 BNIP3Q12983 259 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 GAB1Q13480 694 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 SLBPQ14493 270 aaKnown RBP eCLIP21.51■■□□□ 1.03
PNKP-201ENST00000322344 FAHD1Q6P587 224 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 GALNT10Q86SR1 603 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 ANKRD13BQ86YJ7 626 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 SPPL3Q8TCT6 385 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 FKBP10Q96AY3 582 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 C7orf34Q96L11 122 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 LINC00615Q96LM1 132 aaPredicted RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 DUSP21Q9H596 190 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 EXD2Q9NVH0 621 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 THUMPD1Q9NXG2 353 aaKnown RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 NDRG4Q9ULP0 352 aaKnown RBP21.51■■□□□ 1.03
PNKP-201ENST00000322344 PADI2Q9Y2J8 665 aa21.51■■□□□ 1.03
PNKP-201ENST00000322344 DOCK6Q96HP0 2047 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 C17orf113A0A1B0GUU1 675 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 SPINT1O43278 529 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 SH3BGRLO75368 114 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 DIRAS1O95057 198 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 FGBP02675 491 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 EFNA1P20827 205 aaPredicted RBP21.5■■□□□ 1.03
PNKP-201ENST00000322344 IRS1P35568 1242 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 PIGFQ07326 219 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 LAPTM4AQ15012 233 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 KIAA1614Q5VZ46 1190 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 TSPYL5Q86VY4 417 aaPredicted RBP21.5■■□□□ 1.03
PNKP-201ENST00000322344 TRAPPC5Q8IUR0 188 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 ATG16L2Q8NAA4 619 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.5■■□□□ 1.03
PNKP-201ENST00000322344 TPD52L3Q96J77 140 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 DOHHQ9BU89 302 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 FUNDC2Q9BWH2 189 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 DGCR6LQ9BY27 220 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 CCDC90BQ9GZT6 254 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 OR2AG1Q9H205 316 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 RAD21L1Q9H4I0 556 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 DMRT3Q9NQL9 472 aa21.5■■□□□ 1.03
PNKP-201ENST00000322344 GALNT8Q9NY28 637 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms