RNA–Protein interactions for RNA: ENST00000321253.6

TUBA3D-201, Transcript of tubulin alpha 3d, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBA3D, Length 1,546 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3D-201ENST00000321253 HMX2A2RU54 273 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 SYCE1LA8MT33 242 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 SUPT3HB4E1H0 165 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 H0YIG0 161 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 FOXS1O43638 330 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 KERAO60938 352 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 H2AFYO75367 372 aaKnown RBP13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 SUPT3HO75486 399 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 STK16O75716 305 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 KRT38O76015 456 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 CXCR2P25025 360 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 GGT5P36269 586 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 HSPA7P48741 367 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 IRF9Q00978 393 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 KLC1Q07866 573 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 RGS1Q08116 209 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 PWP1Q13610 501 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 RBBP5Q15291 538 aaKnown RBP13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 TEX35Q5T0J7 233 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 TCTN3Q6NUS6 607 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 KLC3Q6P597 504 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 AMER3Q8N944 861 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 SNX31Q8N9S9 440 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 KCT2Q8NC54 265 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 LRRN4CLQ8ND94 238 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 ZNF740Q8NDX6 193 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 OR9A4Q8NGU2 314 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 NXNL1Q96CM4 212 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 VPS11Q9H270 941 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 MKKSQ9NPJ1 570 aaPredicted RBP13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 C14orf105Q9NVL8 296 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 GPRC5BQ9NZH0 403 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 ZFP69BQ9UJL9 534 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 MRPS2Q9Y399 296 aaKnown RBP13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 MAP4K5Q9Y4K4 846 aa13.92□□□□□ -0.18
TUBA3D-201ENST00000321253 IGLV3-12A0A075B6K2 115 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 EXOC1LA0A1B0GW35 172 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 CCDC189A1A4V9 331 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 AGPSO00116 658 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 FFAR3O14843 346 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 CLGNO14967 610 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 GPR42O15529 346 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 TAPBPO15533 448 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 CCNT2O60583 730 aaKnown RBP13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 NSA2O95478 260 aaKnown RBP13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 ALDOAP04075 364 aaKnown RBP13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 ABHD2P08910 425 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 C1GALT1C1LP0DN25 315 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 IL1RNP18510 177 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 CNTFP26441 200 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 AHRP35869 848 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 SCTRP47872 440 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 PGDP52209 483 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 PDK4Q16654 411 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 FBXO48Q5FWF7 155 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 VWA2Q5GFL6 755 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 DCAF10Q5QP82 559 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 PRICKLE2Q7Z3G6 844 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 PTRH1Q86Y79 214 aaKnown RBP13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 TMEM151BQ8IW70 566 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 CENPLQ8N0S6 344 aaPredicted RBP13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 TRPV3Q8NET8 790 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 SPNS1Q9H2V7 528 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 C3orf18Q9UK00 162 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 PTBP2Q9UKA9 531 aaKnown RBP13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 PCDHGA9Q9Y5G4 932 aaKnown RBP13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 SLC22A7Q9Y694 548 aa13.91□□□□□ -0.18
TUBA3D-201ENST00000321253 A6NL46 340 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 UBXN8O00124 270 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 KLHL2O95198 593 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 VARSP26640 1264 aaKnown RBP13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 GLRBP48167 497 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 SKP1P63208 163 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 MAT1AQ00266 395 aaKnown RBP13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 SLBPQ14493 270 aaKnown RBP eCLIP13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 HERC3Q15034 1050 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 ACAP2Q15057 778 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 LGSNQ5TDP6 509 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 ATG9BQ674R7 924 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 SLCO4C1Q6ZQN7 724 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 ASB18Q6ZVZ8 466 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 PRSS41Q7RTY9 318 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 LRRC70Q7Z2Q7 622 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 KRT78Q8N1N4 520 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 RHEBL1Q8TAI7 183 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 ESAMQ96AP7 390 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 ATOH8Q96SQ7 321 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 CD244Q9BZW8 370 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 ZNF180Q9UJW8 692 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 FBXL4Q9UKA2 621 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 HS3ST3B1Q9Y662 390 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 ZNF462Q96JM2 2506 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 MED13Q9UHV7 2174 aa13.9□□□□□ -0.18
TUBA3D-201ENST00000321253 URADA6NGE7 173 aa13.9□□□□□ -0.19
TUBA3D-201ENST00000321253 SGK494L7N484 410 aa13.9□□□□□ -0.19
TUBA3D-201ENST00000321253 RIPK2O43353 540 aa13.9□□□□□ -0.19
TUBA3D-201ENST00000321253 HEXBP07686 556 aa13.9□□□□□ -0.19
TUBA3D-201ENST00000321253 NR1D1P20393 614 aa13.9□□□□□ -0.19
TUBA3D-201ENST00000321253 KCNC1P48547 511 aa13.9□□□□□ -0.19
TUBA3D-201ENST00000321253 CSRP3P50461 194 aa13.9□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms