RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 RAD18Q9NS91 495 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 VPS29Q9UBQ0 182 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 POFUT2Q9Y2G5 429 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 ZNF451Q9Y4E5 1061 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 PCDHGB6Q9Y5F9 930 aa18.43■□□□□ 0.54
RTN4-201ENST00000317610 NPIPB15A6NHN6 443 aaPredicted RBP18.42■□□□□ 0.54
RTN4-201ENST00000317610 A8MVJ9 347 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 PTHP01270 115 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 STSP08842 583 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 ANXA8P13928 327 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 GATMP50440 423 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 SELENOWP63302 87 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 CARTPTQ16568 116 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 ARMCX4Q5H9R4 360 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 C10orf62Q5T681 223 aaPredicted RBP18.42■□□□□ 0.54
RTN4-201ENST00000317610 SLX4IPQ5VYV7 408 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 RETSATQ6NUM9 610 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 C19orf48Q6RUI8 117 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 CRTC1Q6UUV9 634 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 CCBE1Q6UXH8 406 aaPredicted RBP18.42■□□□□ 0.54
RTN4-201ENST00000317610 TMEM173Q86WV6 379 aaPredicted RBP18.42■□□□□ 0.54
RTN4-201ENST00000317610 DEPDC4Q8N2C3 294 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 ZNF486Q96H40 463 aaPredicted RBP18.42■□□□□ 0.54
RTN4-201ENST00000317610 P2RY13Q9BPV8 354 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 CENPOQ9BU64 300 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 RNF167Q9H6Y7 350 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 GPR83Q9NYM4 423 aa18.42■□□□□ 0.54
RTN4-201ENST00000317610 FAM47E-STBD1D6RA91 191 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 RGS13O14921 159 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 OR56A5P0C7T3 313 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 ZNF24P17028 368 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 CD22P20273 847 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 ITPKAP23677 461 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 RCVRNP35243 200 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 BMPR1AP36894 532 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 AP1S2P56377 157 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 PFN3P60673 137 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 TEAD4Q15561 434 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 SOWAHCQ53LP3 525 aaPredicted RBP18.41■□□□□ 0.54
RTN4-201ENST00000317610 HEATR4Q86WZ0 1026 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 VRK3Q8IV63 474 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 SYTL1Q8IYJ3 562 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 APCDD1Q8J025 514 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 CENPFP49454 3210 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 LOC100506127A0A0U1RQW1 187 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 PNMA8CA0A1B0GUJ8 204 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 A8MX80 341 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 UPK3BL1B0FP48 263 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 NT5C1B-RDH14C9J2C7 533 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 UPK3BL2E5RIL1 263 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 PLK4O00444 970 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 KMOO15229 486 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 ALOX12P18054 663 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 HSPA14Q0VDF9 509 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 CDH18Q13634 790 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 ATP13A5Q4VNC0 1218 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 ZNF367Q7RTV3 350 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 ZNF605Q86T29 641 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 CCDC190Q86UF4 302 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 RASGRP3Q8IV61 690 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 PCSK9Q8NBP7 692 aaKnown RBP18.41■□□□□ 0.54
RTN4-201ENST00000317610 C11orf65Q8NCR3 313 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 C9orf43Q8TAL5 461 aaPredicted RBP18.41■□□□□ 0.54
RTN4-201ENST00000317610 ATL1Q8WXF7 558 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 C2orf49Q9BVC5 232 aaPredicted RBP18.41■□□□□ 0.54
RTN4-201ENST00000317610 NMRK2Q9NPI5 230 aa18.41■□□□□ 0.54
RTN4-201ENST00000317610 PSMD11O00231 422 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 GALTP07902 379 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 CYP2A7P20853 494 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 PIK3CBP42338 1070 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 GJA8P48165 433 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 NUDT6P53370 316 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 ZXDBP98169 803 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 GAB1Q13480 694 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 STX19Q8N4C7 294 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 PAF1Q8N7H5 531 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 IL17RDQ8NFM7 739 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 BCL7CQ8WUZ0 217 aaPredicted RBP18.4■□□□□ 0.54
RTN4-201ENST00000317610 MAL2Q969L2 176 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 RLIMQ9NVW2 624 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 NPAP1Q9NZP6 1156 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 VPS4AQ9UN37 437 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 LOC110117498-PIK3R3F6TDL0 507 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 GREM1O60565 184 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 ZNF821O75541 412 aaPredicted RBP18.4■□□□□ 0.54
RTN4-201ENST00000317610 DEFA1P59665 94 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 DEFA3P59666 94 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 ST3GAL4Q11206 333 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 PLEKHS1Q5SXH7 462 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 TPRG1Q6ZUI0 275 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 CCDC80Q76M96 950 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 NPAS3Q8IXF0 933 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 SPPL2AQ8TCT8 520 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 PIK3R3Q92569 461 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 UPF1Q92900 1129 aaKnown RBP eCLIP18.4■□□□□ 0.548e-30■■□□□ 13.3
RTN4-201ENST00000317610 VOPP1Q96AW1 172 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 Q96MT0 163 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 FBXL12Q9NXK8 326 aa18.4■□□□□ 0.54
RTN4-201ENST00000317610 MBD1Q9UIS9 605 aaPredicted RBP18.4■□□□□ 0.54
RTN4-201ENST00000317610 GABRQQ9UN88 632 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms