RNA–Protein interactions for RNA: ENST00000317173.8

MSRA-201, Transcript of methionine sulfoxide reductase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRA, Length 1,536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRA-201ENST00000317173 NOP53Q9NZM5 478 aaKnown RBP13.49□□□□□ -0.25
MSRA-201ENST00000317173 VPS29Q9UBQ0 182 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 PADI4Q9UM07 663 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 WASF3Q9UPY6 502 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 GOLGA4Q13439 2230 aaKnown RBP13.49□□□□□ -0.25
MSRA-201ENST00000317173 MAGEB17A8MXT2 336 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 CLEC3AO75596 197 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 TYRP1P17643 537 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 PTX3P26022 381 aaPredicted RBP13.49□□□□□ -0.25
MSRA-201ENST00000317173 MAPK1P28482 360 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 RPS15AP62244 130 aaKnown RBP13.49□□□□□ -0.25
MSRA-201ENST00000317173 HMGCS1Q01581 520 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 MEF2AQ02078 507 aaPredicted RBP13.49□□□□□ -0.25
MSRA-201ENST00000317173 CUL3Q13618 768 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 DDX39BQ13838 428 aaKnown RBP13.49□□□□□ -0.25
MSRA-201ENST00000317173 RBBP5Q15291 538 aaKnown RBP13.49□□□□□ -0.25
MSRA-201ENST00000317173 FAM219BQ5XKK7 198 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.49□□□□□ -0.25
MSRA-201ENST00000317173 FAM9CQ8IZT9 166 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 FNDC5Q8NAU1 212 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 ZNF740Q8NDX6 193 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 ADAMTS14Q8WXS8 1223 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 NAT6Q93015 286 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 MTFMTQ96DP5 389 aaKnown RBP13.49□□□□□ -0.25
MSRA-201ENST00000317173 CATSPER2Q96P56 530 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 MTERF1Q99551 399 aaKnown RBP13.49□□□□□ -0.25
MSRA-201ENST00000317173 CCDC106Q9BWC9 280 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 EIF3LQ9Y262 564 aaKnown RBP13.49□□□□□ -0.25
MSRA-201ENST00000317173 NEUROG3Q9Y4Z2 214 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 CAPN7Q9Y6W3 813 aa13.49□□□□□ -0.25
MSRA-201ENST00000317173 COL5A1P20908 1838 aaPredicted RBP13.48□□□□□ -0.25
MSRA-201ENST00000317173 CAPN14A8MX76 684 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 TRIM38O00635 465 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 OR1F1O43749 312 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 DUX1O43812 170 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 SEMA3DO95025 777 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 LDOC1O95751 146 aaPredicted RBP13.48□□□□□ -0.25
MSRA-201ENST00000317173 ALDOCP09972 364 aaKnown RBP13.48□□□□□ -0.25
MSRA-201ENST00000317173 RPS13P62277 151 aaKnown RBP13.48□□□□□ -0.25
MSRA-201ENST00000317173 KIAA0040Q15053 153 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 GALNTL6Q49A17 601 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 SPIN4Q56A73 249 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 TMEM198Q66K66 360 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 FOXR1Q6PIV2 292 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 CCDC121Q6ZUS5 278 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 MFSD9Q8NBP5 474 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 TRPV3Q8NET8 790 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 ZDHHC12Q96GR4 267 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 APOLD1Q96LR9 279 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 BRINP2Q9C0B6 783 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 ABCG4Q9H172 646 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 SEMA6CQ9H3T2 930 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 SDR39U1Q9NRG7 319 aaPredicted RBP13.48□□□□□ -0.25
MSRA-201ENST00000317173 C1GALT1Q9NS00 363 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 AIG1Q9NVV5 245 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 SIRT5Q9NXA8 310 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 SLC12A4Q9UP95 1085 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 COPG1Q9Y678 874 aaKnown RBP13.48□□□□□ -0.25
MSRA-201ENST00000317173 AP1M2Q9Y6Q5 423 aa13.48□□□□□ -0.25
MSRA-201ENST00000317173 IGHV1OR21-1A0A087WYE8 117 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 EME2A4GXA9 379 aaPredicted RBP13.47□□□□□ -0.25
MSRA-201ENST00000317173 HAT1O14929 419 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 SIGLEC6O43699 453 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 HYAL3O43820 417 aaPredicted RBP13.47□□□□□ -0.25
MSRA-201ENST00000317173 SEC22BO75396 215 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 ATP5HO75947 161 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 KIAA0754O94854 1291 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 DKK1O94907 266 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 UBOX5O94941 541 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 PRPS2P11908 318 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 MAGP20916 626 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 PRDX6P30041 224 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 ACADVLP49748 655 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 DUSP3P51452 185 aaPredicted RBP13.47□□□□□ -0.25
MSRA-201ENST00000317173 ARFIP1P53367 373 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 RPL38P63173 70 aaKnown RBP13.47□□□□□ -0.25
MSRA-201ENST00000317173 KLF10Q13118 480 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 RFTN2Q52LD8 501 aaPredicted RBP13.47□□□□□ -0.25
MSRA-201ENST00000317173 PDCD4Q53EL6 469 aaKnown RBP13.47□□□□□ -0.25
MSRA-201ENST00000317173 FIGLAQ6QHK4 219 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 ZNF771Q7L3S4 317 aaPredicted RBP13.47□□□□□ -0.25
MSRA-201ENST00000317173 VN1R5Q7Z5H4 357 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 MIER2Q8N344 545 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 EID2Q8N6I1 236 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 ANKRD53Q8N9V6 530 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 AHCYL2Q96HN2 611 aaKnown RBP13.47□□□□□ -0.25
MSRA-201ENST00000317173 CNDP2Q96KP4 475 aaKnown RBP13.47□□□□□ -0.25
MSRA-201ENST00000317173 FCRL1Q96LA6 429 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 CENPKQ9BS16 269 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 SCNM1Q9BWG6 230 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 MS4A8Q9BY19 250 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 CHRNA10Q9GZZ6 450 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 PRM3Q9NNZ6 103 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 AHSPQ9NZD4 102 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 ARMCX1Q9P291 453 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 RUVBL1Q9Y265 456 aaKnown RBP13.47□□□□□ -0.25
MSRA-201ENST00000317173 PCDHGA4Q9Y5G9 962 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 PCDHGA1Q9Y5H4 931 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 GPR45Q9Y5Y3 372 aa13.47□□□□□ -0.25
MSRA-201ENST00000317173 ACACBO00763 2458 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms