RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ZNF451Q9Y4E5 1061 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 KCNE2Q9Y6J6 123 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 GFRA2O00451 464 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PRKYO43930 277 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 IFNA7P01567 189 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 GSTM1P09488 218 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SMIM10L2AP0DMW4 78 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SMIM10L2BP0DMW5 78 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PTPN6P29350 595 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CLCN7P51798 805 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PNLIPRP1P54315 467 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 NKX3-2P78367 333 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 HSF2Q03933 536 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CACNB2Q08289 660 aaPredicted RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 HSPA14Q0VDF9 509 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 MICAQ29983 383 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TMEM44Q2T9K0 475 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 FBXO48Q5FWF7 155 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PTCHD4Q6ZW05 846 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 GET4Q7L5D6 327 aaPredicted RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ATCAYQ86WG3 371 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TRIM48Q8IWZ4 208 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 OR6J1Q8NGC5 347 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 HHIPQ96QV1 700 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SNTG1Q9NSN8 517 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TAS2R7Q9NYW3 318 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 MARCH2Q9P0N8 246 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TIMM13Q9Y5L4 95 aaPredicted RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PIPSLA2A3N6 862 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TUBAL3A6NHL2 446 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 M0QZQ0 153 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 OR7A17O14581 309 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 FPGTO14772 594 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CPNE3O75131 537 aaKnown RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ITGA10O75578 1167 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 GPX5O75715 221 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 PDGFAP04085 211 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 IFNW1P05000 195 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 MMP3P08254 477 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SDC1P18827 310 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CSTF2P33240 577 aaKnown RBP eCLIP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TALDO1P37837 337 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 KCNQ1P51787 676 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ARHGEF7Q14155 803 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CPSF6Q16630 551 aaKnown RBP eCLIP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TIGD5Q53EQ6 642 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 SGO1Q5FBB7 561 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ZBTB2Q8N680 514 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 YIPF7Q8N8F6 280 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 GEMIN6Q8WXD5 167 aaKnown RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 ELMO1Q92556 727 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 AKAP1Q92667 903 aaKnown RBP eCLIP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 HBEGFQ99075 208 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 BARD1Q99728 777 aaKnown RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 DUSP26Q9BV47 211 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 CNPPD1Q9BV87 410 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 TAPBPLQ9BX59 468 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 POLR2J2Q9GZM3 115 aaKnown RBP4.62□□□□□ -1.67
PTPN13-201ENST00000316707 P2RY12Q9H244 342 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 DNAJC11Q9NVH1 559 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 KCTD5Q9NXV2 234 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 MUTYHQ9UIF7 546 aa4.62□□□□□ -1.67
PTPN13-201ENST00000316707 HYKKA2RU49 373 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ANKRD66B4E2M5 251 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SCAMP3O14828 347 aaKnown RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 UGDHO60701 494 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SLC22A5O76082 557 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 MSL3P1P0C860 447 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PCGF2P35227 344 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ATP12AP54707 1039 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 AP1S1P61966 158 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SELENOWP63302 87 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 VGLL4Q14135 290 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 NDUFA9Q16795 377 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 KLHL22Q53GT1 634 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ALFQ53S48 1182 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 PRSS36Q5K4E3 855 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 TMEM201Q5SNT2 666 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 CPTPQ5TA50 214 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 FRG2Q64ET8 278 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 LAIR1Q6GTX8 287 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SCN4BQ8IWT1 228 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 CREB3L1Q96BA8 519 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 OTULINQ96BN8 352 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 TMEM80Q96HE8 168 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 NEDD4LQ96PU5 975 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 FRG2BQ96QU4 278 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 RHNO1Q9BSD3 238 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 APOL5Q9BWW9 433 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 C11orf54Q9H0W9 315 aaPredicted RBP4.61□□□□□ -1.67
PTPN13-201ENST00000316707 MIR1-1HGQ9H1L0 117 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 TNKS2Q9H2K2 1166 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 GLS2Q9UI32 602 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 NEUROG3Q9Y4Z2 214 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 LTBP3Q9NS15 1303 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 LINC00862A6NCI5 91 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 ERVH48-1M5A8F1 160 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 HAS3O00219 553 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 TNFRSF10BO14763 440 aa4.61□□□□□ -1.67
PTPN13-201ENST00000316707 SLC30A4O14863 429 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms