RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 CNPPD1Q9BV87 410 aa7□□□□□ -1.29
SOX6-201ENST00000316399 C12orf65Q9H3J6 166 aaKnown RBP7□□□□□ -1.29
SOX6-201ENST00000316399 PELI2Q9HAT8 420 aa7□□□□□ -1.29
SOX6-201ENST00000316399 ACOT13Q9NPJ3 140 aa7□□□□□ -1.29
SOX6-201ENST00000316399 TSPAN6O43657 245 aa7□□□□□ -1.29
SOX6-201ENST00000316399 SCN2BO60939 215 aa7□□□□□ -1.29
SOX6-201ENST00000316399 KAT7O95251 611 aa7□□□□□ -1.29
SOX6-201ENST00000316399 S100A6P06703 90 aa7□□□□□ -1.29
SOX6-201ENST00000316399 CCNIQ14094 377 aa7□□□□□ -1.29
SOX6-201ENST00000316399 ZNF460Q14592 562 aa7□□□□□ -1.29
SOX6-201ENST00000316399 PDE12Q6L8Q7 609 aaKnown RBP7□□□□□ -1.29
SOX6-201ENST00000316399 TMEM220Q6QAJ8 160 aa7□□□□□ -1.29
SOX6-201ENST00000316399 RASSF6Q6ZTQ3 369 aa7□□□□□ -1.29
SOX6-201ENST00000316399 SLC15A3Q8IY34 581 aa7□□□□□ -1.29
SOX6-201ENST00000316399 SGCDQ92629 289 aa7□□□□□ -1.29
SOX6-201ENST00000316399 REEP4Q9H6H4 257 aa7□□□□□ -1.29
SOX6-201ENST00000316399 Q9N2J8 555 aa7□□□□□ -1.29
SOX6-201ENST00000316399 SNTG1Q9NSN8 517 aa7□□□□□ -1.29
SOX6-201ENST00000316399 ZFP57Q9NU63 452 aa7□□□□□ -1.29
SOX6-201ENST00000316399 TMEM189-UBE2V1I3L0A0 370 aa7□□□□□ -1.29
SOX6-201ENST00000316399 PPM1BO75688 479 aa7□□□□□ -1.29
SOX6-201ENST00000316399 ACRV1P26436 265 aa7□□□□□ -1.29
SOX6-201ENST00000316399 AKT2P31751 481 aa7□□□□□ -1.29
SOX6-201ENST00000316399 SEPHS1P49903 392 aa7□□□□□ -1.29
SOX6-201ENST00000316399 PHC1P78364 1004 aa7□□□□□ -1.29
SOX6-201ENST00000316399 BNIP3Q12983 259 aa7□□□□□ -1.29
SOX6-201ENST00000316399 RAB39AQ14964 217 aa7□□□□□ -1.29
SOX6-201ENST00000316399 PON3Q15166 354 aa7□□□□□ -1.29
SOX6-201ENST00000316399 SEC23BQ15437 767 aa7□□□□□ -1.29
SOX6-201ENST00000316399 UPP1Q16831 310 aa7□□□□□ -1.29
SOX6-201ENST00000316399 TXNRD3NBQ6F5E7 133 aa7□□□□□ -1.29
SOX6-201ENST00000316399 SLC27A4Q6P1M0 643 aa7□□□□□ -1.29
SOX6-201ENST00000316399 SLC51AQ86UW1 340 aa7□□□□□ -1.29
SOX6-201ENST00000316399 OR5P2Q8WZ92 322 aa7□□□□□ -1.29
SOX6-201ENST00000316399 BMFQ96LC9 184 aa7□□□□□ -1.29
SOX6-201ENST00000316399 MTERF1Q99551 399 aaKnown RBP7□□□□□ -1.29
SOX6-201ENST00000316399 C19orf43Q9BQ61 176 aa7□□□□□ -1.29
SOX6-201ENST00000316399 G6PC3Q9BUM1 346 aa7□□□□□ -1.29
SOX6-201ENST00000316399 NMUR1Q9HB89 426 aa7□□□□□ -1.29
SOX6-201ENST00000316399 INPP5EQ9NRR6 644 aa7□□□□□ -1.29
SOX6-201ENST00000316399 MBLAC1A4D2B0 266 aaPredicted RBP7□□□□□ -1.29
SOX6-201ENST00000316399 PEX14O75381 377 aa7□□□□□ -1.29
SOX6-201ENST00000316399 RLN2P04090 185 aa7□□□□□ -1.29
SOX6-201ENST00000316399 CSKP41240 450 aa7□□□□□ -1.29
SOX6-201ENST00000316399 FAM171BQ6P995 826 aa7□□□□□ -1.29
SOX6-201ENST00000316399 SERPINA11Q86U17 422 aa7□□□□□ -1.29
SOX6-201ENST00000316399 MRGPRX2Q96LB1 330 aa7□□□□□ -1.29
SOX6-201ENST00000316399 ZNF597Q96LX8 424 aa7□□□□□ -1.29
SOX6-201ENST00000316399 PCDHAC1Q9H158 963 aa7□□□□□ -1.29
SOX6-201ENST00000316399 BTNL2Q9UIR0 455 aa7□□□□□ -1.29
SOX6-201ENST00000316399 SCP2D1Q9UJQ7 156 aa7□□□□□ -1.29
SOX6-201ENST00000316399 CMAHPQ9Y471 501 aa7□□□□□ -1.29
SOX6-201ENST00000316399 TMEM150CB9EJG8 249 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 KMOO15229 486 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 TBX1O43435 398 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 ITGAMP11215 1152 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 GADD45AP24522 165 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 AGTR1P30556 359 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 ACTR1BP42025 376 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 CHRNA4P43681 627 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 HNRNPFP52597 415 aaKnown RBP6.99□□□□□ -1.29
SOX6-201ENST00000316399 SDHAF4Q5VUM1 108 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 TCEAL6Q6IPX3 200 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 ZNF767PQ75MW2 155 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 LYSMD3Q7Z3D4 306 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 C1orf52Q8N6N3 182 aaKnown RBP6.99□□□□□ -1.29
SOX6-201ENST00000316399 CST11Q9H112 138 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 BRF2Q9HAW0 419 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 MYH10P35580 1976 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 COL22A1Q8NFW1 1626 aaPredicted RBP6.99□□□□□ -1.29
SOX6-201ENST00000316399 KANTRA0A1W2PQU2 76 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 OR5K4A6NMS3 321 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 VEGFDO43915 354 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 PRAF2O60831 178 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 EPHX1P07099 455 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 GRM2Q14416 872 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 SFT2D3Q587I9 215 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 CNKSR3Q6P9H4 555 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 HS3ST5Q8IZT8 346 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 PNPLA2Q96AD5 504 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 ALPK1Q96QP1 1244 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 CD180Q99467 661 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 POTEKPQ9BYX7 375 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 FAIMQ9NVQ4 179 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 PCDHAC2Q9Y5I4 1007 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 TNRC6CQ9HCJ0 1690 aaKnown RBP6.99□□□□□ -1.29
SOX6-201ENST00000316399 FAM214AQ32MH5 1076 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 GGTA1PQ4G0N0 100 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 OR52E8Q6IFG1 317 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 RD3Q7Z3Z2 195 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 TRIM74Q86UV6 250 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 TRIM73Q86UV7 250 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 INO80EQ8NBZ0 244 aaPredicted RBP6.99□□□□□ -1.29
SOX6-201ENST00000316399 UXS1Q8NBZ7 420 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 NSUN3Q9H649 340 aaKnown RBP6.99□□□□□ -1.29
SOX6-201ENST00000316399 CD93Q9NPY3 652 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 HEBP1Q9NRV9 189 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 ELOA3DA6NLF2 546 aaPredicted RBP6.99□□□□□ -1.29
SOX6-201ENST00000316399 ZNF670-ZNF695F2Z2N8 137 aa6.99□□□□□ -1.29
SOX6-201ENST00000316399 CAPN5O15484 640 aaPredicted RBP6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms