RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 LIPKQ5VXJ0 399 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 NXPE1Q8N323 547 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 ZFP41Q8N8Y5 198 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 PHOX2BQ99453 314 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 SLC30A2Q9BRI3 323 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 ASPNQ9BXN1 380 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 OSGEPL1Q9H4B0 414 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 CACYBPQ9HB71 228 aaKnown RBP13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 MED16Q9Y2X0 877 aa13.85□□□□□ -0.19
CSNK1D-202ENST00000314028 UPK1AO00322 258 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 ADAM12O43184 909 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 ERAL1O75616 437 aaKnown RBP13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 STC2O76061 302 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 GABARAPO95166 117 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 PRLP01236 227 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 RETP07949 1114 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 GSTM5P46439 218 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 SLC11A1P49279 550 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 RPS7P62081 194 aaKnown RBP13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 SNRPD1P62314 119 aaKnown RBP13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 SCARB2Q14108 478 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 PCBP2Q15366 365 aaKnown RBP eCLIP13.84□□□□□ -0.193e-8■■■■■ 30
CSNK1D-202ENST00000314028 IQCCQ4KMZ1 466 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 GCNT6Q5T4J0 391 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 DDI2Q5TDH0 399 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 NEK5Q6P3R8 708 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 SYCE2Q6PIF2 218 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 TSPYL5Q86VY4 417 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 PEX13Q92968 403 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 FAM129BQ96TA1 746 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 CCM2Q9BSQ5 444 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 YIPF4Q9BSR8 244 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 ARHGAP39Q9C0H5 1083 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.84□□□□□ -0.192e-11■■■■■ 38.1
CSNK1D-202ENST00000314028 FNIP2Q9P278 1114 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 OARD1Q9Y530 152 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 PCDHGA3Q9Y5H0 932 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 WNT9AO14904 365 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 CASKO14936 926 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 TAPBPO15533 448 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 CDRT1O95170 752 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 KLKB1P03952 638 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 BMP1P13497 986 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 CA5AP35218 305 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 CLCN7P51798 805 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 CNTN1Q12860 1018 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 NFE2L1Q14494 772 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 TRIM40Q6P9F5 258 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 SLC16A12Q6ZSM3 486 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 PRSS48Q7RTY5 328 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 CMTM8Q8IZV2 173 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 PARP16Q8N5Y8 322 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 RAET1EQ8TD07 263 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 EXOSC8Q96B26 276 aaKnown RBP13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 ARMC5Q96C12 935 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 WRAP53Q9BUR4 548 aaKnown RBP13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 NLNQ9BYT8 704 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 TBC1D17Q9HA65 648 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 IL1RAPQ9NPH3 570 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 ABCB8Q9NUT2 735 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 PCDHGB6Q9Y5F9 930 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 CLCA3PQ9Y6N3 262 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 ZNF831Q5JPB2 1677 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 FAM240BA0A1B0GVZ2 78 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 FABP12A6NFH5 140 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 OR6C70A6NIJ9 312 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 SCAMP1O15126 338 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 TSPAN12O95859 305 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 CAPNS1P04632 268 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 IFNW1P05000 195 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 PSKH1P11801 424 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 BUD31P41223 144 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 RPS13P62277 151 aaKnown RBP13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 TARDBPQ13148 414 aaKnown RBP eCLIP13.84□□□□□ -0.192e-6■■■□□ 16.4
CSNK1D-202ENST00000314028 QPRTQ15274 297 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 LEXMQ3ZCV2 418 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 C5orf22Q49AR2 442 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 CLEC12AQ5QGZ9 265 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 C8orf82Q6P1X6 216 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 RNF130Q86XS8 419 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 METTL4Q8N3J2 472 aa13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 SPIN1Q9Y657 262 aaPredicted RBP13.84□□□□□ -0.19
CSNK1D-202ENST00000314028 THSD7AQ9UPZ6 1657 aa13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 FADS2P1A8MWK0 482 aa13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 CCNB2O95067 398 aa13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 CH25HO95992 272 aa13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 PTHP01270 115 aa13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 PTGER1P34995 402 aa13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 MANFP55145 182 aaKnown RBP13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 SNRPD2P62316 118 aaKnown RBP13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 CLLU1OSQ5K130 101 aa13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 GTF2IRD2BQ6EKJ0 949 aa13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 Q6ZVL8 140 aa13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 Q6ZVU0 165 aa13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 GTF2IRD2Q86UP8 949 aa13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 TEX26Q8N6G2 289 aa13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 TCEANCQ8N8B7 351 aa13.83□□□□□ -0.2
CSNK1D-202ENST00000314028 ASZ1Q8WWH4 475 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms