RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 IL1AP01583 271 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 ALDOAP04075 364 aaKnown RBP8.56□□□□□ -1.04
COL6A5-202ENST00000312481 MEF2AQ02078 507 aaPredicted RBP8.56□□□□□ -1.04
COL6A5-202ENST00000312481 HSPB2Q16082 182 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 CAND1Q86VP6 1230 aaKnown RBP8.56□□□□□ -1.04
COL6A5-202ENST00000312481 RNF148Q8N7C7 305 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 THAP6Q8TBB0 222 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 SYT11Q9BT88 431 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 TCF7L1Q9HCS4 588 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 XPNPEP1Q9NQW7 623 aa8.56□□□□□ -1.04
COL6A5-202ENST00000312481 PAK1IP1Q9NWT1 392 aaPredicted RBP8.56□□□□□ -1.04
COL6A5-202ENST00000312481 ADAMTS3O15072 1205 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 GLUD1P00367 558 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 JUNBP17275 347 aaPredicted RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 MRPL19P49406 292 aaKnown RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CES5AQ6NT32 575 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CLEC20AQ6ZU45 233 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 NUP54Q7Z3B4 507 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 HS3ST5Q8IZT8 346 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 TOMM5Q8N4H5 51 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 OR5T2Q8NGG2 359 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 ELP5Q8TE02 316 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 JPH3Q8WXH2 748 aaPredicted RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 TMBIM1Q969X1 311 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 PHOX2BQ99453 314 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 ANKRD19PQ9H560 264 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 OLAHQ9NV23 265 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 SIP14410 1827 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 P2RX6O15547 441 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 B3GALT2O43825 422 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 FCER2P06734 321 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CLUP10909 449 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CD53P19397 219 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 ETV4P43268 484 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 GRSF1Q12849 480 aaKnown RBP eCLIP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 ZIK1Q3SY52 487 aaPredicted RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CRB2Q5IJ48 1285 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 KCTD20Q7Z5Y7 419 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 TRNT1Q96Q11 434 aaKnown RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 TRPM7Q96QT4 1865 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CCNL2Q96S94 520 aaPredicted RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 NT5C1B-RDH14C9J2C7 533 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 HOXC13P31276 330 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 RPL4P36578 427 aaKnown RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 ECI1P42126 302 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 NOGQ13253 232 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CHTF18Q8WVB6 975 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CANT1Q8WVQ1 401 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 MFSD3Q96ES6 412 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 SAMD11Q96NU1 681 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 HEBP1Q9NRV9 189 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 ENPP5Q9UJA9 477 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CREBL2O60519 120 aaPredicted RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 VNN1O95497 513 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 SCARB2Q14108 478 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 RAET1GQ6H3X3 334 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 THOC6Q86W42 341 aaKnown RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 SLAIN1Q8ND83 568 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CIDECQ96AQ7 238 aaPredicted RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 NXPE2Q96DL1 559 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 ZSWIM3Q96MP5 696 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 IL4I1Q96RQ9 567 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 POLR3BQ9NW08 1133 aaPredicted RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 DNMT3AQ9Y6K1 912 aaPredicted RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 WASF2Q9Y6W5 498 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 SPTBN1Q01082 2364 aaKnown RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 ARRDC5A6NEK1 342 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 TLR4O00206 839 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 DCLK1O15075 740 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 KDELR3O43731 214 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 RFPL2O75678 378 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 TPPPO94811 219 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 DHCR24Q15392 516 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CA9Q16790 459 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 RETREG3Q86VR2 466 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 AMZ2Q86W34 360 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 DCP2Q8IU60 420 aaKnown RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 OR2T33Q8NG76 320 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CEP76Q8TAP6 659 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 TWNKQ96RR1 684 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 POLMQ9NP87 494 aaPredicted RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 EDDM13A0A1B0GTR0 161 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 LRRC72A6NJI9 287 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 KRBOX1C9JBD0 128 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CAPN5O15484 640 aaPredicted RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 OR5F1O95221 314 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CTSHP09668 335 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 SELPP16109 830 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CDK2P24941 298 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 ILF3Q12906 894 aaKnown RBP eCLIP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 CHIT1Q13231 466 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 WSCD2Q2TBF2 565 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 METTL11BQ5VVY1 283 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 C5orf46Q6UWT4 87 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 LGI4Q8N135 537 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 OMDQ99983 421 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 RIOK2Q9BVS4 552 aaKnown RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 SAV1Q9H4B6 383 aaPredicted RBP8.55□□□□□ -1.04
COL6A5-202ENST00000312481 ZNF639Q9UID6 485 aa8.55□□□□□ -1.04
COL6A5-202ENST00000312481 BTNL2Q9UIR0 455 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms