RNA–Protein interactions for RNA: ENST00000309422.6

VEGFB-201, Transcript of vascular endothelial growth factor B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VEGFB, Length 1,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFB-201ENST00000309422 TMIGD1Q6UXZ0 262 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 OVCH1Q7RTY7 1134 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 MYLK4Q86YV6 388 aaPredicted RBP18.87■□□□□ 0.61
VEGFB-201ENST00000309422 LSM14AQ8ND56 463 aaKnown RBP18.87■□□□□ 0.61
VEGFB-201ENST00000309422 EXTL1Q92935 676 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 MIEF2Q96C03 454 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 WBP1Q96G27 269 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 RUFY1Q96T51 708 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 SARGQ9BW04 601 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 TRPC4Q9UBN4 977 aa18.87■□□□□ 0.61
VEGFB-201ENST00000309422 H0YIG0 161 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 TAPBPO15533 448 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 P2RX6O15547 441 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 STATHP02808 62 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 HSD17B3P37058 310 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 SLCO1A2P46721 670 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 GCGRP47871 477 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 TGM3Q08188 693 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 SSPNQ14714 243 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 ERCC6LQ2NKX8 1250 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 FBXO48Q5FWF7 155 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 LCN10Q6JVE6 187 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 METTL2BQ6P1Q9 378 aaKnown RBP18.86■□□□□ 0.61
VEGFB-201ENST00000309422 VN1R4Q7Z5H5 301 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 RIBC1Q8N443 379 aaPredicted RBP18.86■□□□□ 0.61
VEGFB-201ENST00000309422 ATP6V1E2Q96A05 226 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 MKKSQ9NPJ1 570 aaPredicted RBP18.86■□□□□ 0.61
VEGFB-201ENST00000309422 ZZEF1O43149 2961 aa18.86■□□□□ 0.61
VEGFB-201ENST00000309422 A0A0A6YYC8 382 aaPredicted RBP18.85■□□□□ 0.61
VEGFB-201ENST00000309422 I3L1I5 382 aaPredicted RBP18.85■□□□□ 0.61
VEGFB-201ENST00000309422 MAP2K7O14733 419 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 NSA2O95478 260 aaKnown RBP18.85■□□□□ 0.61
VEGFB-201ENST00000309422 VARSP26640 1264 aaKnown RBP18.85■□□□□ 0.61
VEGFB-201ENST00000309422 SERPINB1P30740 379 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 CSRP3P50461 194 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 CHIT1Q13231 466 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 NAA30Q147X3 362 aaPredicted RBP18.85■□□□□ 0.61
VEGFB-201ENST00000309422 TBR1Q16650 682 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 ZXDCQ2QGD7 858 aaPredicted RBP18.85■□□□□ 0.61
VEGFB-201ENST00000309422 TMEM214Q6NUQ4 689 aaKnown RBP18.85■□□□□ 0.61
VEGFB-201ENST00000309422 SLCO4C1Q6ZQN7 724 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 TDRPQ86YL5 185 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 TEX9Q8N6V9 391 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 PTGR2Q8N8N7 351 aaPredicted RBP18.85■□□□□ 0.61
VEGFB-201ENST00000309422 CAVIN3Q969G5 261 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 ESAMQ96AP7 390 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 REPS1Q96D71 796 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 FAR2Q96K12 515 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 FER1L6-AS2Q96M78 137 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 CENPKQ9BS16 269 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 CRB3Q9BUF7 120 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 IQCGQ9H095 443 aaKnown RBP18.85■□□□□ 0.61
VEGFB-201ENST00000309422 SLC26A1Q9H2B4 701 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 ACTR8Q9H981 624 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 ACSS2Q9NR19 701 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 MAP4K5Q9Y4K4 846 aa18.85■□□□□ 0.61
VEGFB-201ENST00000309422 KMT2BQ9UMN6 2715 aaPredicted RBP18.84■□□□□ 0.61
VEGFB-201ENST00000309422 ATXN7O15265 892 aaPredicted RBP18.84■□□□□ 0.61
VEGFB-201ENST00000309422 GLRA3O75311 464 aa18.84■□□□□ 0.61
VEGFB-201ENST00000309422 GSTA1P08263 222 aa18.84■□□□□ 0.61
VEGFB-201ENST00000309422 IL10RAQ13651 578 aa18.84■□□□□ 0.61
VEGFB-201ENST00000309422 COL9A2Q14055 689 aaPredicted RBP18.84■□□□□ 0.61
VEGFB-201ENST00000309422 RBBP7Q16576 425 aa18.84■□□□□ 0.61
VEGFB-201ENST00000309422 ATP1A1-AS1Q5TC04 95 aa18.84■□□□□ 0.61
VEGFB-201ENST00000309422 MFSD4BQ5TF39 518 aa18.84■□□□□ 0.61
VEGFB-201ENST00000309422 MRPL14Q6P1L8 145 aaKnown RBP18.84■□□□□ 0.61
VEGFB-201ENST00000309422 PLD6Q8N2A8 252 aaKnown RBP18.84■□□□□ 0.61
VEGFB-201ENST00000309422 NT5CQ8TCD5 201 aa18.84■□□□□ 0.61
VEGFB-201ENST00000309422 NACC2Q96BF6 587 aa18.84■□□□□ 0.61
VEGFB-201ENST00000309422 ADNPQ9H2P0 1102 aa18.84■□□□□ 0.61
VEGFB-201ENST00000309422 EPB41L4BQ9H329 900 aa18.84■□□□□ 0.61
VEGFB-201ENST00000309422 SOX17Q9H6I2 414 aaPredicted RBP18.84■□□□□ 0.61
VEGFB-201ENST00000309422 GEMIN8Q9NWZ8 242 aaKnown RBP18.84■□□□□ 0.61
VEGFB-201ENST00000309422 CTSFQ9UBX1 484 aa18.84■□□□□ 0.61
VEGFB-201ENST00000309422 DCDC2Q9UHG0 476 aa18.84■□□□□ 0.61
VEGFB-201ENST00000309422 SLC22A7Q9Y694 548 aa18.84■□□□□ 0.61
VEGFB-201ENST00000309422 ZFHX4Q86UP3 3567 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 STX16-NPEPL1H3BU86 382 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 TK2O00142 265 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 STX16O14662 325 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 LCMT2O60294 686 aaKnown RBP18.83■□□□□ 0.61
VEGFB-201ENST00000309422 RFPL1O75677 317 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 ONECUT2O95948 504 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 SHBGP04278 402 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 CAPN1P07384 714 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 IL1RNP18510 177 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 GCAP28676 217 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 CCT5P48643 541 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 POLE2P56282 527 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 NFKB2Q00653 900 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 TBCCQ15814 346 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 NKG7Q16617 165 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 IRAK1BP1Q5VVH5 260 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 MED27Q6P2C8 311 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.83■□□□□ 0.61
VEGFB-201ENST00000309422 PPP4R1Q8TF05 950 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 AENQ8WTP8 325 aaKnown RBP18.83■□□□□ 0.61
VEGFB-201ENST00000309422 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.83■□□□□ 0.61
VEGFB-201ENST00000309422 PHF21BQ96EK2 531 aa18.83■□□□□ 0.61
VEGFB-201ENST00000309422 MAGEB10Q96LZ2 347 aaPredicted RBP18.83■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms