RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 SVOPQ8N4V2 548 aa9.99□□□□□ -0.81
APOBEC3F-201ENST00000308521 GLB1L3Q8NCI6 653 aaPredicted RBP9.99□□□□□ -0.81
APOBEC3F-201ENST00000308521 FRS2Q8WU20 508 aa9.99□□□□□ -0.81
APOBEC3F-201ENST00000308521 SMARCD2Q92925 531 aa9.99□□□□□ -0.81
APOBEC3F-201ENST00000308521 PPP3R2Q96LZ3 170 aa9.99□□□□□ -0.81
APOBEC3F-201ENST00000308521 GDF15Q99988 308 aa9.99□□□□□ -0.81
APOBEC3F-201ENST00000308521 RPP25Q9BUL9 199 aaKnown RBP9.99□□□□□ -0.81
APOBEC3F-201ENST00000308521 BOCQ9BWV1 1114 aa9.99□□□□□ -0.81
APOBEC3F-201ENST00000308521 ASPSCR1Q9BZE9 553 aa9.99□□□□□ -0.81
APOBEC3F-201ENST00000308521 PLA2G2FQ9BZM2 168 aa9.99□□□□□ -0.81
APOBEC3F-201ENST00000308521 CD274Q9NZQ7 290 aa9.99□□□□□ -0.81
APOBEC3F-201ENST00000308521 ERVK-18Q9QC07 812 aa9.99□□□□□ -0.81
APOBEC3F-201ENST00000308521 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 NCF1BA6NI72 391 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 NCF1CA8MVU1 366 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 FAM220BPB1ANY3 271 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CCRL2O00421 344 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 PRMT5O14744 637 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 NIPSNAP2O75323 286 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 LEFTY1O75610 366 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 NCF1P14598 390 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 PKMP14618 531 aaKnown RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 AKT1P31749 480 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 ST13P50502 369 aaKnown RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 METAP1P53582 386 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 TARDBPQ13148 414 aaKnown RBP eCLIP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 LAPTM5Q13571 262 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 DNASE1L3Q13609 305 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 PON2Q15165 354 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 AP5B1Q2VPB7 878 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 ATG9BQ674R7 924 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 SHQ1Q6PI26 577 aaKnown RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CRTC1Q6UUV9 634 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 IL27RAQ6UWB1 636 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 PLPP6Q8IY26 295 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 FAM109AQ8N4B1 249 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CLDN19Q8N6F1 224 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 OR10A6Q8NH74 314 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 DNAJB8Q8NHS0 232 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 METTL6Q8TCB7 284 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 MRGPRX3Q96LB0 322 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 KXD1Q9BQD3 176 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 THUMPD3Q9BV44 507 aaKnown RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CCNB1IP1Q9NPC3 277 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 SCN3BQ9NY72 215 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 KLQ9UEF7 1012 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 TRMT6Q9UJA5 497 aaKnown RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 OSGIN1Q9UJX0 560 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 POLR3HQ9Y535 204 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 TNPO3Q9Y5L0 923 aaKnown RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 SLC9A3R1O14745 358 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 XPNPEP2O43895 674 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CREG1O75629 220 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 RECQL5O94762 991 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 PRAMEF1O95521 474 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CAPN1P07384 714 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CTSLP07711 333 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CISD3P0C7P0 127 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 BPIP17213 487 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 LHCGRP22888 699 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 PTGS2P35354 604 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 EIF2DP41214 584 aaKnown RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 HTR6P50406 440 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 IL2P60568 153 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 SRP54P61011 504 aaKnown RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 IL5RAQ01344 420 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 MAD2L1Q13257 205 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 RAPSNQ13702 412 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CLCA4Q14CN2 919 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 NR6A1Q15406 480 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 HABP4Q5JVS0 413 aaKnown RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 RSBN1Q5VWQ0 802 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 LRRC66Q68CR7 880 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CAPN13Q6MZZ7 669 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 ZNF544Q6NX49 715 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 B3GNT8Q7Z7M8 397 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 DSG4Q86SJ6 1040 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CALHM3Q86XJ0 350 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CHPFQ8IZ52 775 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 KIAA1958Q8N8K9 716 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 OR52B6Q8NGF0 335 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CNIH3Q8TBE1 160 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 UQCC2Q9BRT2 126 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 SLIRPQ9GZT3 109 aaKnown RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 EPS8L2Q9H6S3 715 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 ASB8Q9H765 288 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 IL26Q9NPH9 171 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 UTS2RQ9UKP6 389 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CAB39Q9Y376 341 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 CCL27Q9Y4X3 112 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 COMMD10Q9Y6G5 202 aa9.98□□□□□ -0.81
APOBEC3F-201ENST00000308521 DOCK8Q8NF50 2099 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 CLDN24A6NM45 220 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 POP4O95707 220 aaKnown RBP9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 IL6P05231 212 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 UGT2B10P36537 528 aa9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 RECQLP46063 649 aaPredicted RBP9.97□□□□□ -0.81
APOBEC3F-201ENST00000308521 VBP1P61758 197 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms