RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 SAMD11Q96NU1 681 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 HBEGFQ99075 208 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 SH3GL1Q99961 368 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 BEGAINQ9BUH8 593 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 BOCQ9BWV1 1114 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 B3GNT4Q9C0J1 378 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 MIR1-1HGQ9H1L0 117 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 C3orf14Q9HBI5 128 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 ACAD8Q9UKU7 415 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 ZFP37Q9Y6Q3 630 aaPredicted RBP5.25□□□□□ -1.57
VPS50-202ENST00000305866 V9GYQ6 96 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 NRG2O14511 850 aaPredicted RBP5.25□□□□□ -1.57
VPS50-202ENST00000305866 NDUFB5O43674 189 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 TPST2O60704 377 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 NBNO60934 754 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 NUDT7P0C024 238 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 FPR1P21462 350 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 ATP5C1P36542 298 aaKnown RBP5.25□□□□□ -1.57
VPS50-202ENST00000305866 RPS19P39019 145 aaKnown RBP5.25□□□□□ -1.57
VPS50-202ENST00000305866 TGM4P49221 684 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 SLC11A1P49279 550 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 SLC11A2P49281 568 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 TUFMP49411 452 aaKnown RBP5.25□□□□□ -1.57
VPS50-202ENST00000305866 HNMTP50135 292 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 PSPHP78330 225 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 ASAH1Q13510 395 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 RAB33AQ14088 237 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 DGUOKQ16854 277 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 AP5B1Q2VPB7 878 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 NEK5Q6P3R8 708 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 FUT10Q6P4F1 479 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 NRARPQ7Z6K4 114 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 TCEAL8Q8IYN2 117 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 TCTE3Q8IZS6 198 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 LIX1Q8N485 282 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 ARIH2OSQ8N7S6 290 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 FBXO30Q8TB52 745 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 CXorf40BQ96DE9 158 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 SLC12A9Q9BXP2 914 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 NSUN3Q9H649 340 aaKnown RBP5.25□□□□□ -1.57
VPS50-202ENST00000305866 IL21Q9HBE4 155 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 TRIM39Q9HCM9 518 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 THSD1Q9NS62 852 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 CD274Q9NZQ7 290 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 RNF112Q9ULX5 631 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 RAI2Q9Y5P3 530 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 MYO15AQ9UKN7 3530 aa5.25□□□□□ -1.57
VPS50-202ENST00000305866 TLR5O60602 858 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 B4GALT2O60909 372 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 AP2A2O94973 939 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 CCNDBP1O95273 360 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 CELF2O95319 508 aaKnown RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 ETHE1O95571 254 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 PDYNP01213 254 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 TRBC1P01850 177 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 LINC00271P0C7V0 271 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 PRPS2P11908 318 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 SRCP12931 536 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 SELPP16109 830 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 IGFBP5P24593 272 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 FMO4P31512 558 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 DNAJA1P31689 397 aaKnown RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 GRK4P32298 578 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 SOX11P35716 441 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 EPHA5P54756 1037 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 CSNK2BP67870 215 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 HOXC5Q00444 222 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 ABHD18Q0P651 414 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 VEZF1Q14119 521 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 TAF1CQ15572 869 aaPredicted RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 CCDC92Q53HC0 331 aaPredicted RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 C12orf73Q69YU5 71 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 SPESP1Q6UW49 350 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 IFNEQ86WN2 208 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 NR2C2APQ86WQ0 139 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 GPSM1Q86YR5 675 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 SLC38A6Q8IZM9 456 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 SETD6Q8TBK2 473 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 SP7Q8TDD2 431 aaPredicted RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 RNF34Q969K3 372 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 COQ8BQ96D53 544 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 CMTM7Q96FZ5 175 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 DCLRE1CQ96SD1 692 aaKnown RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 CCDC32Q9BV29 185 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 SIK2Q9H0K1 926 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 EPHX3Q9H6B9 360 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 CCSER2Q9H7U1 834 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 BRF2Q9HAW0 419 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 SPC25Q9HBM1 224 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 MRPS18AQ9NVS2 196 aaKnown RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 CRNNQ9UBG3 495 aaPredicted RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 C3orf18Q9UK00 162 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 MAPRE3Q9UPY8 281 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 HS3ST2Q9Y278 367 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 LRP4O75096 1905 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 IQCMA0A1B0GVH7 501 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.24□□□□□ -1.57
VPS50-202ENST00000305866 GOLGA8CPA6NN73 597 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 SNX2O60749 519 aa5.24□□□□□ -1.57
VPS50-202ENST00000305866 FADS2O95864 444 aaKnown RBP5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms