RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 WRAP53Q9BUR4 548 aaKnown RBP12.44□□□□□ -0.42
HIF3A-204ENST00000300862 THUMPD1Q9NXG2 353 aaKnown RBP12.44□□□□□ -0.42
HIF3A-204ENST00000300862 RUVBL1Q9Y265 456 aaKnown RBP12.44□□□□□ -0.42
HIF3A-204ENST00000300862 WNT6Q9Y6F9 365 aa12.44□□□□□ -0.42
HIF3A-204ENST00000300862 GOLGA4Q13439 2230 aaKnown RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 UGT2B11O75310 529 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 FPR1P21462 350 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 PSMB9P28065 219 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 IMPA1P29218 277 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 MASP1P48740 699 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 METAP1P53582 386 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 CSTF3Q12996 717 aaKnown RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 CYP27C1Q4G0S4 372 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 ZC3H12BQ5HYM0 836 aaKnown RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 CATSPEREQ5SY80 951 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 IER5LQ5T953 404 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 CPTPQ5TA50 214 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 ZDHHC20Q5W0Z9 365 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 ZNF852Q6ZMS4 543 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 OTOP2Q7RTS6 562 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 TMPRSS11BQ86T26 416 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 NAGSQ8N159 534 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 SCAIQ8N9R8 606 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 ZNF540Q8NDQ6 660 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 OR7G3Q8NG95 312 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 OR8J2Q8NGG1 315 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 NDNFQ8TB73 568 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 FBLIM1Q8WUP2 373 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 RORBQ92753 470 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 IRF7Q92985 503 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 NEIL2Q969S2 332 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 FCRL1Q96LA6 429 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 PSD2Q9BQI7 771 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 ZBP1Q9H171 429 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 KRT84Q9NSB2 600 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 RPS6KA6Q9UK32 745 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 SH2B3Q9UQQ2 575 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 NAALAD2Q9Y3Q0 740 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 PCDHB11Q9Y5F2 797 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 SCAMP2O15127 329 aaKnown RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 PCDH7O60245 1069 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 FKTNO75072 461 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 PSIP1O75475 530 aaKnown RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 OXSR1O95747 527 aaPredicted RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 MT-ND2P03891 347 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 SEMG1P04279 462 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 XPAP23025 273 aaPredicted RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 VBP1P61758 197 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 RPS13P62277 151 aaKnown RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 NTHL1P78549 312 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 MEF2AQ02078 507 aaPredicted RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 HENMT1Q5T8I9 393 aaKnown RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 LILRA6Q6PI73 481 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 BRAT1Q6PJG6 821 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 TMEM220Q6QAJ8 160 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 CBLL1Q75N03 491 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 EIF3MQ7L2H7 374 aaKnown RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 ELMOD1Q8N336 334 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 ALOXE3Q9BYJ1 711 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 ASPSCR1Q9BZE9 553 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 CEP44Q9C0F1 390 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 REEP1Q9H902 201 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 PAK6Q9NQU5 681 aaPredicted RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 PRDM8Q9NQV8 689 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 TMEM184CQ9NVA4 438 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 FAM120CQ9NX05 1096 aaKnown RBP12.43□□□□□ -0.42
HIF3A-204ENST00000300862 ERVW-1Q9UQF0 538 aa12.43□□□□□ -0.42
HIF3A-204ENST00000300862 NPIPB8E9PQR5 432 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 KPNA5O15131 536 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 GNRH1P01148 92 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 TGFBR1P36897 503 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 WDR5P61964 334 aaKnown RBP12.42□□□□□ -0.42
HIF3A-204ENST00000300862 SLC35A2P78381 396 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 MC1RQ01726 317 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 CREMQ03060 361 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 FPGSQ05932 587 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 ACOX1Q15067 660 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 ADPRMQ3LIE5 342 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 ZNF385BQ569K4 471 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 COX20Q5RI15 118 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 CAPN13Q6MZZ7 669 aaPredicted RBP12.42□□□□□ -0.42
HIF3A-204ENST00000300862 GPR153Q6NV75 609 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 FAM180BQ6P0A1 224 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 SETD9Q8NE22 299 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 ZFP90Q8TF47 636 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 BTN2A2Q8WVV5 523 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 C11orf24Q96F05 449 aaPredicted RBP12.42□□□□□ -0.42
HIF3A-204ENST00000300862 RUBCNLQ9H714 662 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 TBX21Q9UL17 535 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 TSC22D4Q9Y3Q8 395 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 MGAT4DA6NG13 374 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 HIDE1A8MVS5 230 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 KDM1AO60341 852 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 FAM20BO75063 409 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 MYO1DO94832 1006 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 CYP2A6P11509 494 aaPredicted RBP12.42□□□□□ -0.42
HIF3A-204ENST00000300862 TGM1P22735 817 aa12.42□□□□□ -0.42
HIF3A-204ENST00000300862 CRATP43155 626 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms