RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 MPSTP25325 297 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 OSTF1Q92882 214 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 CXorf40BQ96DE9 158 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 GLT1D1Q96MS3 346 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 ZNF490Q9ULM2 529 aaPredicted RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 GOSR2O14653 212 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 OR8U9P0C7N5 309 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 RPL23AP62750 156 aaKnown RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 hCG_2039718K7EN88 272 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 CLCN4P51793 760 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 SV2AQ7L0J3 742 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 KBTBD6Q86V97 674 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 C22orf15Q8WYQ4 148 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 PTERQ96BW5 349 aa10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 NUFIP1Q9UHK0 495 aaKnown RBP10.88□□□□□ -0.67
HDGFL3-201ENST00000299633 XRN1Q8IZH2 1706 aaKnown RBP10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 NAV3Q8IVL0 2385 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 DPEP1P16444 411 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 RAET1GQ6H3X3 334 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 PSTKQ8IV42 348 aaKnown RBP10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 LILRB2Q8N423 598 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 DNTTIP1Q9H147 329 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 THG1LQ9NWX6 298 aaKnown RBP10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 A0A1B0GVM2 712 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 MTMR11A4FU01 709 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 TCAF2A6NFQ2 919 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 CASTOR2A6NHX0 329 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 APOC4-APOC2K7ER74 178 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 RGL2O15211 777 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 APOC2P02655 101 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 SMSP52788 366 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 TICAM1Q8IUC6 712 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 MMP27Q9H306 513 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 B3GAT3O94766 335 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 ATG12O94817 140 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 LHX1P48742 406 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 CLCN7P51798 805 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 TLDC1Q6P9B6 456 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 TRABD2AQ86V40 505 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 TMEM185AQ8NFB2 350 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC25A36Q96CQ1 311 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 RFPL2O75678 378 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 TKTL1P51854 596 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 PLEKHO2Q8TD55 490 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 LCMT2O60294 686 aaKnown RBP10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 G0S2P27469 103 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 KIR3DL1P43629 444 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 NPBWR1P48145 328 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 BTN1A1Q13410 526 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 CLEC12AQ5QGZ9 265 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 SLC39A4Q6P5W5 647 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 KCNT2Q6UVM3 1135 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 DPEP2Q9H4A9 486 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 MASP1P48740 699 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 C2orf80Q0P641 193 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 FAM156AQ8NDB6 213 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 FNDC8Q8TC99 324 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 FAM151AQ8WW52 585 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 NOL4LQ96MY1 436 aaPredicted RBP10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 MTFR1LQ9H019 292 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 LRTM1Q9HBL6 345 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 MCCC2Q9HCC0 563 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 DDX43Q9NXZ2 648 aaKnown RBP10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 PLLPQ9Y342 182 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 NKRFO15226 690 aaKnown RBP eCLIP10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 EEF1E1O43324 174 aaKnown RBP10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 ASPAP45381 313 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 CHIT1Q13231 466 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 HTR3EA5X5Y0 456 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 INMT-MINDY4F8WBC2 141 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 EPHB6O15197 1021 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 TESMINQ9Y4I5 508 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 ST14Q9Y5Y6 855 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 CDC7O00311 574 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 DFFBO76075 338 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 C8BP07358 591 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 BPIP17213 487 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 TAGLNQ01995 201 aaKnown RBP10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 CBX2Q14781 532 aaPredicted RBP10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 ST7LQ8TDW4 575 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 SNAPC3Q92966 411 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 RIOX1Q9H6W3 641 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.87□□□□□ -0.673e-7■■■■□ 24.1
HDGFL3-201ENST00000299633 GPSM3Q9Y4H4 160 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 NOX1Q9Y5S8 564 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 ARL6IP5O75915 188 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 HNRNPA0Q13151 305 aaKnown RBP10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 MAMLD1Q13495 774 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 PLPP5Q8NEB5 264 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 OR10A6Q8NH74 314 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 C16orf78Q8WTQ4 265 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 TBCBQ99426 244 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 POT1Q9NUX5 634 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 TNFRSF10DQ9UBN6 386 aa10.87□□□□□ -0.67
HDGFL3-201ENST00000299633 C22orf31O95567 290 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 HLA-DPB1P04440 258 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 H2AFB2P0C5Z0 115 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 NR2C1P13056 603 aa10.86□□□□□ -0.67
HDGFL3-201ENST00000299633 LRRC66Q68CR7 880 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms