RNA–Protein interactions for RNA: ENST00000296978.3

TMEM200A-201, Transcript of transmembrane protein 200A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM200A, Length 3,512 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM200A-201ENST00000296978 LRRC66Q68CR7 880 aa12.16□□□□□ -0.46
TMEM200A-201ENST00000296978 DEF8Q6ZN54 512 aa12.16□□□□□ -0.46
TMEM200A-201ENST00000296978 HJURPQ8NCD3 748 aaPredicted RBP12.16□□□□□ -0.46
TMEM200A-201ENST00000296978 ENKURQ8TC29 256 aa12.16□□□□□ -0.46
TMEM200A-201ENST00000296978 CMTM7Q96FZ5 175 aa12.16□□□□□ -0.46
TMEM200A-201ENST00000296978 COL21A1Q96P44 957 aa12.16□□□□□ -0.46
TMEM200A-201ENST00000296978 SLC29A3Q9BZD2 475 aa12.16□□□□□ -0.46
TMEM200A-201ENST00000296978 SLIRPQ9GZT3 109 aaKnown RBP12.16□□□□□ -0.46
TMEM200A-201ENST00000296978 SIRT5Q9NXA8 310 aa12.16□□□□□ -0.46
TMEM200A-201ENST00000296978 ARHGEF9O43307 516 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 NUAK1O60285 661 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 GADD45GO95257 159 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 PTHP01270 115 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 ACPPP15309 386 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 FAM214AQ32MH5 1076 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 IFI44LQ53G44 452 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 PYDC2Q56P42 97 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 KDM4DQ6B0I6 523 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 LAIR1Q6GTX8 287 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 USP45Q70EL2 814 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 TRIM69Q86WT6 500 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 ZSWIM9Q86XI8 627 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 APCDD1Q8J025 514 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 SCAMP4Q969E2 229 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 CCM2Q9BSQ5 444 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 VCANP13611 3396 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 PLXNA1Q9UIW2 1896 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 GFRA2O00451 464 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 ADAM12O43184 909 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 TGFB1P01137 390 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 MAGEA11P43364 429 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 STK19P49842 368 aaPredicted RBP12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 C2orf80Q0P641 193 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 C1DQ13901 141 aaKnown RBP12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 ZNF181Q2M3W8 571 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 IER5LQ5T953 404 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 TXNDC8Q6A555 127 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 SERPINA13PQ6UXR4 307 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 DBF4BQ8NFT6 615 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 GGHQ92820 318 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 YIPF6Q96EC8 236 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 DIRAS2Q96HU8 199 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 SLC30A2Q9BRI3 323 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 RPRD1BQ9NQG5 326 aaKnown RBP12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 TEKT2Q9UIF3 430 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 NOX1Q9Y5S8 564 aa12.15□□□□□ -0.46
TMEM200A-201ENST00000296978 MYLKQ15746 1914 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 CCDC182A6NF36 153 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 CLCA1A8K7I4 914 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 J3KTA2 159 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 TSPAN19P0C672 248 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 CA5AP35218 305 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 HNF4AP41235 474 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 SLC11A1P49279 550 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 NDUFA5Q16718 116 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 TNFAIP8L2Q6P589 184 aaPredicted RBP12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 RSPO2Q6UXX9 243 aaPredicted RBP12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 ZNF517Q6ZMY9 492 aaPredicted RBP12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 KRT73Q86Y46 540 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 AQP11Q8NBQ7 271 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 DNAJB8Q8NHS0 232 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 SOCS4Q8WXH5 440 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 FOXJ1Q92949 421 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 WBP2Q969T9 261 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 ZIC5Q96T25 663 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 HTATIP2Q9BUP3 242 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 POLR2J2Q9GZM3 115 aaKnown RBP12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 TBC1D14Q9P2M4 693 aa12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 RUVBL1Q9Y265 456 aaKnown RBP12.15□□□□□ -0.47
TMEM200A-201ENST00000296978 PDCD11Q14690 1871 aaKnown RBP12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 ISPDA4D126 451 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 OR2A25A4D2G3 310 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 KCNK5O95279 499 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 PSMA1P25786 263 aaKnown RBP12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 NRIP1P48552 1158 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 ATN1P54259 1190 aaPredicted RBP12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 AP1S1P61966 158 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 BCL7AQ4VC05 210 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 ZNF544Q6NX49 715 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 TAS1R1Q7RTX1 841 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 CLP1Q92989 425 aaKnown RBP12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 C1GALT1C1Q96EU7 318 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 FBXO8Q9NRD0 319 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 RLIMQ9NVW2 624 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 TRPC4Q9UBN4 977 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 AREL1O15033 823 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 PCDH7O60245 1069 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 PREPP48147 710 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 MEF2AQ02078 507 aaPredicted RBP12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 ZNF45Q02386 682 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 SCARB2Q14108 478 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 IQCCQ4KMZ1 466 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 ZC3H12BQ5HYM0 836 aaKnown RBP12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 ADCK2Q7Z695 626 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 DEFB128Q7Z7B8 93 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 GALNT12Q8IXK2 581 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 ELMOD1Q8N336 334 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 GPR26Q8NDV2 337 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 OR5M11Q96RB7 305 aa12.14□□□□□ -0.47
TMEM200A-201ENST00000296978 FAM129BQ96TA1 746 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms