RNA–Protein interactions for RNA: ENST00000296861.2

TNFRSF21-201, Transcript of TNF receptor superfamily member 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF21, Length 3,595 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF21-201ENST00000296861 HPRP00739 348 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 NPPAP01160 153 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 PPP5CP53041 499 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 C2orf80Q0P641 193 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 GPR17Q13304 367 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 CCSMST1Q4G0I0 132 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 MRPL10Q7Z7H8 261 aaKnown RBP12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 RNF180Q86T96 592 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 NXPE1Q8N323 547 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 SLC38A4Q969I6 547 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 OR5M11Q96RB7 305 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 CPPED1Q9BRF8 314 aaPredicted RBP12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 TM9SF3Q9HD45 589 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 ANKMY1Q9P2S6 941 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 OARD1Q9Y530 152 aa12.86□□□□□ -0.35
TNFRSF21-201ENST00000296861 OR6C75A6NL08 312 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 E7EQ34 232 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 AOC2O75106 756 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 PTPN5P54829 565 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 SLC35A2P78381 396 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 DUOXA1Q1HG43 343 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 RNASE12Q5GAN4 147 aaKnown RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 AGAP7PQ5VUJ5 663 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 SHQ1Q6PI26 577 aaKnown RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 ZNF852Q6ZMS4 543 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 ZFP41Q8N8Y5 198 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 CNDP2Q96KP4 475 aaKnown RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 YIPF4Q9BSR8 244 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 WRAP53Q9BUR4 548 aaKnown RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 MMP28Q9H239 520 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 KIAA1522Q9P206 1035 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 LSM7Q9UK45 103 aaKnown RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 WBP11Q9Y2W2 641 aaKnown RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 PIKFYVEQ9Y2I7 2098 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 IGLV3-10A0A075B6K4 115 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 AP3D1O14617 1153 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 GABARAPO95166 117 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 IFI30P13284 250 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 SLC19A1P41440 591 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 CLDN8P56748 225 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 ATG9BQ674R7 924 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 NCEH1Q6PIU2 408 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 C11orf65Q8NCR3 313 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 TMEM169Q96HH4 297 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 NIPSNAP1Q9BPW8 284 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 CCM2Q9BSQ5 444 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 SORBS1Q9BX66 1292 aaKnown RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 PDFQ9HBH1 243 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 CCNB1IP1Q9NPC3 277 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 IL1RAPQ9NPH3 570 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 KLHL3Q9UH77 587 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 RTCAO00442 366 aaKnown RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 KPNA3O00505 521 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 C9P02748 559 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 IGFBP1P08833 259 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 RPS13P62277 151 aaKnown RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 IRAK1BP1Q5VVH5 260 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 FAM131AQ6UXB0 335 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 ENTHD1Q8IYW4 607 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 AQP11Q8NBQ7 271 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 RHOXF1Q8NHV9 184 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 RAET1EQ8TD07 263 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 C17orf50Q8WW18 174 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 CIDECQ96AQ7 238 aaPredicted RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 ISG20Q96AZ6 181 aaKnown RBP12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 ARMC5Q96C12 935 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 AKIP1Q9NQ31 210 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 CLEC4AQ9UMR7 237 aa12.85□□□□□ -0.35
TNFRSF21-201ENST00000296861 A0A0C4DFX4 3053 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 PRPS2P11908 318 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 ACRV1P26436 265 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 NSG1P42857 185 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 TUFMP49411 452 aaKnown RBP12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 HSPB3Q12988 150 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 GPRC6AQ5T6X5 926 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 SIX5Q8N196 739 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 GHDCQ8N2G8 530 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 KBTBD8Q8NFY9 601 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 C1GALT1C1Q96EU7 318 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 LINC00597Q9H2U6 94 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 TVP23BQ9NYZ1 205 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 TMCC3Q9ULS5 477 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 PLAGL1Q9UM63 463 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 CKAP5Q14008 2032 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 CDC42P60953 191 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 RACK1P63244 317 aaKnown RBP12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 PPIGQ13427 754 aaKnown RBP eCLIP12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 ZFP69Q49AA0 526 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 SHFQ7M4L6 423 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 ZNF551Q7Z340 670 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 RNF130Q86XS8 419 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 PARP16Q8N5Y8 322 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 HJURPQ8NCD3 748 aaPredicted RBP12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 TMEM184CQ9NVA4 438 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 ZNF221Q9UK13 617 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 PCDHGA3Q9Y5H0 932 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 CENPXA8MT69 81 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 PCDH17O14917 1159 aa12.84□□□□□ -0.35
TNFRSF21-201ENST00000296861 ZW10O43264 779 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms