RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ALPK3Q96L96 1907 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 LOC100130705A0A1B0GUX0 176 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 PIPSLA2A3N6 862 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 MGAT4DA6NG13 374 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 C6orf47O95873 294 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 ADH1CP00326 375 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 PCCBP05166 539 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 KLK1P06870 262 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 EPHX1P07099 455 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 GPX2P18283 190 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 P2RY2P41231 377 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 HLCSP50747 726 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 C9orf50Q5SZB4 431 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 VN1R5Q7Z5H4 357 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 TSEN54Q7Z6J9 526 aaKnown RBP11.32□□□□□ -0.6
RHO-201ENST00000296271 PLD3Q8IV08 490 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 LRRC56Q8IYG6 542 aaPredicted RBP11.32□□□□□ -0.6
RHO-201ENST00000296271 EID3Q8N140 333 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 ARL10Q8N8L6 244 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 OR8J2Q8NGG1 315 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 OR5K1Q8NHB7 308 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 ADAMTS16Q8TE57 1224 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 SNX19Q92543 992 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 OTUB2Q96DC9 234 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 ASB16Q96NS5 453 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 CSF3RQ99062 836 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 DGCR6LQ9BY27 220 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 PLA2G2FQ9BZM2 168 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 IGFLR1Q9H665 355 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 PRAMEF33A0A0G2JMD5 474 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 FEZF1A0PJY2 475 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 C1orf226A1L170 272 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 IGLON5A6NGN9 336 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 WASHC1A8K0Z3 465 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 HOXC11O43248 304 aaPredicted RBP11.32□□□□□ -0.6
RHO-201ENST00000296271 FGF19O95750 216 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 PRNPP04156 253 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 HNRNPA1P09651 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
RHO-201ENST00000296271 ITGB7P26010 798 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 TIA1P31483 386 aaKnown RBP eCLIP11.32□□□□□ -0.6
RHO-201ENST00000296271 PTGER1P34995 402 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 HNF4AP41235 474 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 ISL1P61371 349 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 ESRRGP62508 458 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 SRSF11Q05519 484 aaKnown RBP11.32□□□□□ -0.6
RHO-201ENST00000296271 C6orf141Q5SZD1 244 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 EGFLAMQ63HQ2 1017 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 MED27Q6P2C8 311 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 TTC23LQ6PF05 361 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 WASH2PQ6VEQ5 465 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 SERPINA11Q86U17 422 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 GALNT13Q8IUC8 556 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 ADHFE1Q8IWW8 467 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 PJA1Q8NG27 643 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 OR4A15Q8NGL6 344 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 OR8D1Q8WZ84 308 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 FOPNLQ96NB1 174 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 FAM83CQ9BQN1 747 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 OSBPL6Q9BZF3 934 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 CUEDC1Q9NWM3 386 aaPredicted RBP11.32□□□□□ -0.6
RHO-201ENST00000296271 PRKAG2Q9UGJ0 569 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 ASF1AQ9Y294 204 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 OR1A2Q9Y585 309 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 PCDHB11Q9Y5F2 797 aa11.32□□□□□ -0.6
RHO-201ENST00000296271 A0A0G2JN53 185 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 CARNS1A5YM72 827 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 NPIPB8E9PQR5 432 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 SLC9A3R1O14745 358 aaPredicted RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 PPM1DO15297 605 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 CCNDBP1O95273 360 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 TBX6O95947 436 aaPredicted RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 FUCA1P04066 466 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 HOXA9P31269 272 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 PBX2P40425 430 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 CRATP43155 626 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 SOX9P48436 509 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 CLK3P49761 638 aaKnown RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 MVDP53602 400 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 TAS2R50P59544 299 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 DYNC1I2Q13409 638 aaKnown RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 KCNC3Q14003 757 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 CAPN13Q6MZZ7 669 aaPredicted RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 HEATR4Q86WZ0 1026 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 ERI1Q8IV48 349 aaKnown RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 OR9A1PQ8NGU1 263 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 GAB3Q8WWW8 586 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 ATL1Q8WXF7 558 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 TANKQ92844 425 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 RBM4BQ9BQ04 359 aaKnown RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 RBM4Q9BWF3 364 aaKnown RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 SLC6A17Q9H1V8 727 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 CHST8Q9H2A9 424 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 TMEM245Q9H330 911 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 PRDM8Q9NQV8 689 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 MBNL1Q9NR56 388 aaKnown RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 PDP1Q9P0J1 537 aaPredicted RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 NFKBIL1Q9UBC1 381 aaPredicted RBP11.31□□□□□ -0.6
RHO-201ENST00000296271 SLC27A6Q9Y2P4 619 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 PRAMEF25A6NGN4 478 aa11.31□□□□□ -0.6
RHO-201ENST00000296271 RFXAPO00287 272 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms