RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 RPS3P23396 243 aaKnown RBP eCLIP12.09□□□□□ -0.47
SLX4-201ENST00000294008 PAX6P26367 422 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 CCND3P30281 292 aaPredicted RBP12.09□□□□□ -0.47
SLX4-201ENST00000294008 GCH1P30793 250 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 PREPP48147 710 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 PKDCCQ504Y2 493 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 CFAP77Q6ZQR2 320 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 RGMAQ96B86 450 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 PORCNQ9H237 461 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 MICAL3Q7RTP6 2002 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 EFCAB6Q5THR3 1501 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 ZNF705FA8MVS1 300 aaPredicted RBP12.09□□□□□ -0.47
SLX4-201ENST00000294008 INSIG1O15503 277 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 ABCB7O75027 752 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 ZNF705DP0CH99 300 aaPredicted RBP12.09□□□□□ -0.47
SLX4-201ENST00000294008 ZNF705BP0CI00 300 aaPredicted RBP12.09□□□□□ -0.47
SLX4-201ENST00000294008 AMY2BP19961 511 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 GLRA2P23416 452 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 DLSTP36957 453 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 PSMA6P60900 246 aaKnown RBP12.09□□□□□ -0.47
SLX4-201ENST00000294008 LRFN1Q9P244 771 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 TNFRSF10DQ9UBN6 386 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 SPATA31A1Q5TZJ5 1347 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 A0A1W2PPW3 197 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 SLC2A5P22732 501 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 CCNCP24863 283 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 LSSP48449 732 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 RAB30Q15771 203 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 FAM205BPQ63HN1 556 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 FAM92BQ6ZTR7 304 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 SLC24A5Q71RS6 500 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 SMIM15Q7Z3B0 74 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 NPAS4Q8IUM7 802 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 LPGAT1Q92604 370 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 ACO2Q99798 780 aaKnown RBP12.09□□□□□ -0.47
SLX4-201ENST00000294008 TP53TG5Q9Y2B4 290 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 OR6C70A6NIJ9 312 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 SLC38A8A6NNN8 435 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 POU2F2P09086 479 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 CHRNEQ04844 493 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 UNQ6126/PRO20091Q6UXV3 157 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 CDHR3Q6ZTQ4 885 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 TRMT2AQ8IZ69 625 aaKnown RBP12.09□□□□□ -0.47
SLX4-201ENST00000294008 AMBNQ9NP70 447 aa12.09□□□□□ -0.47
SLX4-201ENST00000294008 ADAMDEC1O15204 470 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 TREHO43280 583 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 MPZL2O60487 215 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 F2RP25116 425 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 HTD2P86397 168 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 KCNC4Q03721 635 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 SLC10A1Q14973 349 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 LRIF1Q5T3J3 769 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 ZDHHC21Q8IVQ6 265 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 HDAC2Q92769 488 aaKnown RBP12.08□□□□□ -0.48
SLX4-201ENST00000294008 ACTR6Q9GZN1 396 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 POLR2J3Q9H1A7 115 aaKnown RBP12.08□□□□□ -0.48
SLX4-201ENST00000294008 SLAMF7Q9NQ25 335 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 SH2D7A6NKC9 451 aaPredicted RBP12.08□□□□□ -0.48
SLX4-201ENST00000294008 AIPO00170 330 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 MTPNP58546 118 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 NAA20P61599 178 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 NOMO3P69849 1222 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 NOMO1Q15155 1222 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 SEC23AQ15436 765 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 IQCCQ4KMZ1 466 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 KRBOX4Q5JUW0 171 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 DCST2Q5T1A1 773 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 KIAA0319Q5VV43 1072 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 ARCQ7LC44 396 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 CCDC116Q8IYX3 515 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 STYXQ8WUJ0 223 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 ZNF681Q96N22 645 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 RAB11FIP5Q9BXF6 653 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 SMG9Q9H0W8 520 aaKnown RBP12.08□□□□□ -0.48
SLX4-201ENST00000294008 WNT9AO14904 365 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 BMP8BP34820 402 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 THBS2P35442 1172 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 PAN3Q58A45 887 aaKnown RBP12.08□□□□□ -0.48
SLX4-201ENST00000294008 EIF5AL1Q6IS14 154 aaKnown RBP12.08□□□□□ -0.48
SLX4-201ENST00000294008 PIWIL4Q7Z3Z4 852 aaKnown RBP12.08□□□□□ -0.48
SLX4-201ENST00000294008 BMP8AQ7Z5Y6 402 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 PITX2Q99697 317 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 SUCNR1Q9BXA5 334 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 POLDIP3Q9BY77 421 aaKnown RBP12.08□□□□□ -0.48
SLX4-201ENST00000294008 MAGEE1Q9HCI5 957 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 PDE7BQ9NP56 450 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 CNTN3Q9P232 1028 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 SRRM3A6NNA2 597 aaPredicted RBP12.08□□□□□ -0.48
SLX4-201ENST00000294008 TP53I11O14683 189 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 HDAC3O15379 428 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 LCMT2O60294 686 aaKnown RBP12.08□□□□□ -0.48
SLX4-201ENST00000294008 GLSO94925 669 aaPredicted RBP12.08□□□□□ -0.48
SLX4-201ENST00000294008 HLA-EP13747 358 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 PTAFRP25105 342 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 FXYD4P59646 89 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 ZNF616Q08AN1 781 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 ERI1Q8IV48 349 aaKnown RBP12.08□□□□□ -0.48
SLX4-201ENST00000294008 PHC2Q8IXK0 858 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 ZNF34Q8IZ26 560 aa12.08□□□□□ -0.48
SLX4-201ENST00000294008 DENND1AQ8TEH3 1009 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms