RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ONECUT2O95948 504 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 EPB42P16452 691 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 SLC18A2Q05940 514 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 CHIT1Q13231 466 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 E2F2Q14209 437 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 MLIPQ5VWP3 458 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 ADNP2Q6IQ32 1131 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 TMEM214Q6NUQ4 689 aaKnown RBP18.91■□□□□ 0.62
TIMP4-201ENST00000287814 RPS27LQ71UM5 84 aaKnown RBP18.91■□□□□ 0.62
TIMP4-201ENST00000287814 TRABD2AQ86V40 505 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 ENDOVQ8N8Q3 282 aaKnown RBP18.91■□□□□ 0.62
TIMP4-201ENST00000287814 CAMKVQ8NCB2 501 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 SNRNP27Q8WVK2 155 aaKnown RBP18.91■□□□□ 0.62
TIMP4-201ENST00000287814 STARD8Q92502 1023 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 NSUN5Q96P11 429 aaKnown RBP18.91■□□□□ 0.62
TIMP4-201ENST00000287814 NLNQ9BYT8 704 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 ACTL8Q9H568 366 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 COPG2Q9UBF2 871 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 KCND3Q9UK17 655 aa18.91■□□□□ 0.62
TIMP4-201ENST00000287814 TNPO3Q9Y5L0 923 aaKnown RBP18.91■□□□□ 0.62
TIMP4-201ENST00000287814 STX16-NPEPL1H3BU86 382 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 STX16O14662 325 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 DLX3O60479 287 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 RAB40ALP0C0E4 278 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 PTPN4P29074 926 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 AHRP35869 848 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 CASP2P42575 452 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 IRF8Q02556 426 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 PCDH1Q08174 1060 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 GTF2H2Q13888 395 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 NCF4Q15080 339 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 BEND6Q5SZJ8 279 aaPredicted RBP18.9■□□□□ 0.62
TIMP4-201ENST00000287814 ATP1A1-AS1Q5TC04 95 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 GARNL3Q5VVW2 1013 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 GTF2H2CQ6P1K8 395 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 TMIGD1Q6UXZ0 262 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 PRSS41Q7RTY9 318 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 GOLGA7Q7Z5G4 137 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.9■□□□□ 0.62
TIMP4-201ENST00000287814 SHISA5Q8N114 240 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 CREB3L4Q8TEY5 395 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 PTCD3Q96EY7 689 aaKnown RBP18.9■□□□□ 0.62
TIMP4-201ENST00000287814 ZIM3Q96PE6 472 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 EFHD1Q9BUP0 239 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 GPR87Q9BY21 358 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 ZBTB26Q9HCK0 441 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 ACSS2Q9NR19 701 aa18.9■□□□□ 0.62
TIMP4-201ENST00000287814 IFT80Q9P2H3 777 aaPredicted RBP18.9■□□□□ 0.62
TIMP4-201ENST00000287814 A0A0A6YYC8 382 aaPredicted RBP18.89■□□□□ 0.61
TIMP4-201ENST00000287814 CCDC151A5D8V7 595 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 I3L1I5 382 aaPredicted RBP18.89■□□□□ 0.61
TIMP4-201ENST00000287814 NDUFS4O43181 175 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 GLRA3O75311 464 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 SERPIND1P05546 499 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 CRHR1P34998 444 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 RPS15P62841 145 aaKnown RBP18.89■□□□□ 0.61
TIMP4-201ENST00000287814 HYAL2Q12891 473 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 TBCCQ15814 346 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 MRPL14Q6P1L8 145 aaKnown RBP18.89■□□□□ 0.61
TIMP4-201ENST00000287814 VN1R5Q7Z5H4 357 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 TBC1D19Q8N5T2 526 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 AICDAQ9GZX7 198 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 PCTPQ9UKL6 214 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 TMCO1Q9UM00 188 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 ANGPTL3Q9Y5C1 460 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 CREG1O75629 220 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 KLF7O75840 302 aaPredicted RBP18.89■□□□□ 0.61
TIMP4-201ENST00000287814 TBX6O95947 436 aaPredicted RBP18.89■□□□□ 0.61
TIMP4-201ENST00000287814 PROCP04070 461 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 FURINP09958 794 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 CXCR2P25025 360 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 PWP1Q13610 501 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 FAM53BQ14153 422 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 METTL2BQ6P1Q9 378 aaKnown RBP18.89■□□□□ 0.61
TIMP4-201ENST00000287814 ZCCHC10Q8TBK6 192 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 NT5CQ8TCD5 201 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 EFCAB11Q9BUY7 163 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 DRC3Q9H069 523 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 KLHL31Q9H511 634 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 NT5DC2Q9H857 520 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 IPPKQ9H8X2 491 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 ZNF304Q9HCX3 659 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 TCFL5Q9UL49 500 aa18.89■□□□□ 0.61
TIMP4-201ENST00000287814 NBEAQ8NFP9 2946 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 G3V2L1 256 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 COPEO14579 308 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 OR7A17O14581 309 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 FFAR3O14843 346 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 GPR42O15529 346 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 CTIFO43310 598 aaKnown RBP18.88■□□□□ 0.61
TIMP4-201ENST00000287814 B3GALT4O96024 378 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 RPS17P08708 135 aaKnown RBP18.88■□□□□ 0.61
TIMP4-201ENST00000287814 SLC35G6P0C7Q6 338 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 PRKAR1AP10644 381 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 CREB1P16220 341 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 CCT5P48643 541 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 KRT71Q3SY84 523 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 PRMT9Q6P2P2 845 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 OVCH1Q7RTY7 1134 aa18.88■□□□□ 0.61
TIMP4-201ENST00000287814 SRRM1Q8IYB3 904 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms