RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 BHLHE41Q9C0J9 482 aaPredicted RBP24.15■■□□□ 1.46
ROM1-201ENST00000278833 REEP1Q9H902 201 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 SLC28A3Q9HAS3 691 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 TDP1Q9NUW8 608 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 IL36AQ9UHA7 158 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 TMEM202A6NGA9 273 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 YY2O15391 372 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 BCAS1O75363 584 aaPredicted RBP24.15■■□□□ 1.46
ROM1-201ENST00000278833 IDSP22304 550 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 HOXA9P31269 272 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 RANBP1P43487 201 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 BMXP51813 675 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 TMED1Q13445 227 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 AQP6Q13520 282 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 GTF2H3Q13889 308 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 CTF1Q16619 201 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 SYT6Q5T7P8 510 aaPredicted RBP24.15■■□□□ 1.46
ROM1-201ENST00000278833 CRTC3Q6UUV7 619 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 XKR5Q6UX68 686 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 PARP8Q8N3A8 854 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 RNF175Q8N4F7 328 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 OR7G3Q8NG95 312 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 PKP4Q99569 1192 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 SCN3BQ9NY72 215 aa24.15■■□□□ 1.46
ROM1-201ENST00000278833 KRT87PA6NCN2 255 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 OR2AG2A6NM03 316 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 FOXE1O00358 373 aaPredicted RBP24.14■■□□□ 1.45
ROM1-201ENST00000278833 CCL16O15467 120 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 CXCL14O95715 111 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 CTSCP53634 463 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 CSNK2BP67870 215 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 EMX1Q04741 257 aaPredicted RBP24.14■■□□□ 1.45
ROM1-201ENST00000278833 HKDC1Q2TB90 917 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 ARSIQ5FYB1 569 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 KIAA1614Q5VZ46 1190 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 PPP2R2DQ66LE6 453 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 SLCO4C1Q6ZQN7 724 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 SVOPQ8N4V2 548 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 C1orf52Q8N6N3 182 aaKnown RBP24.14■■□□□ 1.45
ROM1-201ENST00000278833 CNIH3Q8TBE1 160 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 SH3KBP1Q96B97 665 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 FOPNLQ96NB1 174 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 SIGLEC11Q96RL6 698 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 MTERF1Q99551 399 aaKnown RBP24.14■■□□□ 1.45
ROM1-201ENST00000278833 RIBC2Q9H4K1 309 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 EHD1Q9H4M9 534 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 VPS4AQ9UN37 437 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 BTBD3Q9Y2F9 522 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 SAMHD1Q9Y3Z3 626 aaKnown RBP24.14■■□□□ 1.45
ROM1-201ENST00000278833 GMPPBQ9Y5P6 360 aa24.14■■□□□ 1.45
ROM1-201ENST00000278833 GABRR3A8MPY1 467 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 SLC22A1O15245 554 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 ETHE1O95571 254 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 CTSLP07711 333 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 NNMTP40261 264 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 MAD2L1BPQ15013 274 aaPredicted RBP24.13■■□□□ 1.45
ROM1-201ENST00000278833 TTC29Q8NA56 475 aaPredicted RBP24.13■■□□□ 1.45
ROM1-201ENST00000278833 PUM2Q8TB72 1066 aaKnown RBP eCLIP24.13■■□□□ 1.45
ROM1-201ENST00000278833 IPCEF1Q8WWN9 437 aaPredicted RBP24.13■■□□□ 1.45
ROM1-201ENST00000278833 NECTIN3Q9NQS3 549 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 PDP1Q9P0J1 537 aaPredicted RBP24.13■■□□□ 1.45
ROM1-201ENST00000278833 FZD4Q9ULV1 537 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 TSC22D4Q9Y3Q8 395 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 PCDHGA10Q9Y5H3 936 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 CPSF4O95639 269 aaKnown RBP24.13■■□□□ 1.45
ROM1-201ENST00000278833 EFNA1P20827 205 aaPredicted RBP24.13■■□□□ 1.45
ROM1-201ENST00000278833 KCNJ10P78508 379 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 RGNQ15493 299 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 TEAD2Q15562 447 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 MED27Q6P2C8 311 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 LIPIQ6XZB0 460 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 VTCN1Q7Z7D3 282 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 LAS2Q8IYD9 372 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 OR10Q1Q8NGQ4 319 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 YIPF6Q96EC8 236 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 ADPRHL2Q9NX46 363 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 WARS2Q9UGM6 360 aaKnown RBP24.13■■□□□ 1.45
ROM1-201ENST00000278833 KCNE2Q9Y6J6 123 aa24.13■■□□□ 1.45
ROM1-201ENST00000278833 KIAA1549LQ6ZVL6 1849 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 INMTO95050 263 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 C1QCP02747 245 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 ANXA4P09525 319 aaPredicted RBP24.12■■□□□ 1.45
ROM1-201ENST00000278833 PTX3P26022 381 aaPredicted RBP24.12■■□□□ 1.45
ROM1-201ENST00000278833 CD6P30203 668 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 RPL3P39023 403 aaKnown RBP24.12■■□□□ 1.45
ROM1-201ENST00000278833 BDKRB1P46663 353 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 CRYBA2P53672 197 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 PDE7AQ13946 482 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 PROX2Q3B8N5 592 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 TBC1D25Q3MII6 688 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 LY6G5CQ5SRR4 150 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 ZNF765Q7L2R6 523 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 HUS1BQ8NHY5 278 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 RORBQ92753 470 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 EFCAB11Q9BUY7 163 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 KRT84Q9NSB2 600 aa24.12■■□□□ 1.45
ROM1-201ENST00000278833 THUMPD1Q9NXG2 353 aaKnown RBP24.12■■□□□ 1.45
ROM1-201ENST00000278833 A8MVJ9 347 aa24.11■■□□□ 1.45
ROM1-201ENST00000278833 TTC34A8MYJ7 566 aa24.11■■□□□ 1.45
ROM1-201ENST00000278833 hCG_2039718K7EN88 272 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms