RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 CHN2P52757 468 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 CTBSQ01459 385 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 CHRNB3Q05901 458 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 C2orf80Q0P641 193 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 EOGTQ5NDL2 527 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 LPCAT2Q7L5N7 544 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 EPHX4Q8IUS5 362 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 CLECL1Q8IZS7 167 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 CBR4Q8N4T8 237 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 RAB42Q8N4Z0 105 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 LINC01555Q8NAE3 123 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 VPS37AQ8NEZ2 397 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 NETO1Q8TDF5 533 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 C16orf78Q8WTQ4 265 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 DNASE1L2Q92874 299 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 FAM162AQ96A26 154 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 CXorf40BQ96DE9 158 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 REXO5Q96IC2 774 aaKnown RBP9.21□□□□□ -0.94
TRIM55-201ENST00000276573 OSBPL11Q9BXB4 747 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 CUEDC1Q9NWM3 386 aaPredicted RBP9.21□□□□□ -0.94
TRIM55-201ENST00000276573 SH3BP4Q9P0V3 963 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 PCDHB11Q9Y5F2 797 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 V9GYQ6 96 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 REV3LO60673 3130 aa9.21□□□□□ -0.94
TRIM55-201ENST00000276573 PCM1Q15154 2024 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 ANKDD1BA6NHY2 528 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 SHISA7A6NL88 538 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 PDLIM1O00151 329 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 CLOCKO15516 846 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 C1QCP02747 245 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 MT-ND1P03886 318 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 GBAP04062 536 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 KLK1P06870 262 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 RETP07949 1114 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 GLULP15104 373 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 PSMB5P28074 263 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 ACSL1P33121 698 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 CLDN2P57739 230 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 ZNF763Q0D2J5 394 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 SLC14A1Q13336 389 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 UAP1L1Q3KQV9 507 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 TMTC4Q5T4D3 741 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 DEPDC1Q5TB30 811 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 FAM71E1Q6IPT2 247 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 ENPP6Q6UWR7 440 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 KIAA1324Q6UXG2 1013 aaKnown RBP9.2□□□□□ -0.94
TRIM55-201ENST00000276573 R3HCC1LQ7Z5L2 792 aaKnown RBP9.2□□□□□ -0.94
TRIM55-201ENST00000276573 SERPINA11Q86U17 422 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 MFSD2AQ8NA29 543 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 RPLP0P6Q8NHW5 317 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 SNX19Q92543 992 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 BDH2Q9BUT1 245 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 PITHD1Q9GZP4 211 aaPredicted RBP9.2□□□□□ -0.94
TRIM55-201ENST00000276573 MVB12BQ9H7P6 319 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 YY1AP1Q9H869 796 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 CARS2Q9HA77 564 aaKnown RBP9.2□□□□□ -0.94
TRIM55-201ENST00000276573 NTN4Q9HB63 628 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 FGF22Q9HCT0 170 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 MYNNQ9NPC7 610 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 C8orf4Q9NR00 106 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 DCAF13Q9NV06 445 aaKnown RBP9.2□□□□□ -0.94
TRIM55-201ENST00000276573 IMP3Q9NV31 184 aaKnown RBP9.2□□□□□ -0.94
TRIM55-201ENST00000276573 AHSPQ9NZD4 102 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 PDP2Q9P2J9 529 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 OAZ3Q9UMX2 235 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 CROCCQ5TZA2 2017 aa9.2□□□□□ -0.94
TRIM55-201ENST00000276573 COL4A2P08572 1712 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 RNF103-CHMP3A0A140T963 221 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 VGLL3A8MV65 326 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 H7BY64 318 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 DLGAP1O14490 977 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 PRKD3O94806 890 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 PRSS23O95084 383 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 EPN2O95208 641 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 KCNK5O95279 499 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 RASAL1O95294 804 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 TBX6O95947 436 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 FURINP09958 794 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 IL1RNP18510 177 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 NDUFV2P19404 249 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 EFNA1P20827 205 aaPredicted RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 IGFBP4P22692 258 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 RAB28P51157 221 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 TPMTP51580 245 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 KIAA1024LP59773 190 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 TXNL4AP83876 142 aaKnown RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 REEP5Q00765 189 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 MC1RQ01726 317 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 PRDX1Q06830 199 aaKnown RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 LRRC74AQ0VAA2 488 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 KRT33BQ14525 404 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 RPE65Q16518 533 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 NKG7Q16617 165 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 FBXO43Q4G163 708 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 ZNF385BQ569K4 471 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 NHSL2Q5HYW2 709 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 ZCCHC8Q6NZY4 707 aaKnown RBP9.19□□□□□ -0.94
TRIM55-201ENST00000276573 GPR155Q7Z3F1 870 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 SLC9B2Q86UD5 537 aa9.19□□□□□ -0.94
TRIM55-201ENST00000276573 TRIM69Q86WT6 500 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms