RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 CYTH4Q9UIA0 394 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 PSORS1C1Q9UIG5 152 aa8.93□□□□□ -0.98
PDGFC-201ENST00000274071 M0R233 179 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 AIPO00170 330 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 QSOX1O00391 747 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 HCN1O60741 890 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 PGK1P00558 417 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 POMCP01189 267 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 C9P02748 559 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 S100A9P06702 114 aaKnown RBP8.92□□□□□ -0.98
PDGFC-201ENST00000274071 NMBP08949 121 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 PSMA3P25788 255 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 MAPK1P28482 360 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 PTGER2P43116 358 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 PCP4P48539 62 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 DIO3P55073 304 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 DSC2Q02487 901 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 ACY1Q03154 408 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 CRYZQ08257 329 aaKnown RBP8.92□□□□□ -0.98
PDGFC-201ENST00000274071 CAMK2DQ13557 499 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 IL31Q6EBC2 164 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 TMEM135Q86UB9 458 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 SPNS2Q8IVW8 549 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 CEP97Q8IW35 865 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 COLGALT1Q8NBJ5 622 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 ATP6V1C2Q8NEY4 427 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 TFAP2BQ92481 460 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 NXPE2Q96DL1 559 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 TREX2Q9BQ50 279 aaPredicted RBP8.92□□□□□ -0.98
PDGFC-201ENST00000274071 WDR77Q9BQA1 342 aaPredicted RBP8.92□□□□□ -0.98
PDGFC-201ENST00000274071 MSTO1Q9BUK6 570 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 SEMA4CQ9C0C4 833 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 EMC7Q9NPA0 242 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 EQTNQ9NQ60 294 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 GPATCH2LQ9NWQ4 482 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 IMPAD1Q9NX62 359 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 PTTG3PQ9NZH4 202 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 EPHA6Q9UF33 1036 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 PPIEQ9UNP9 301 aaKnown RBP8.92□□□□□ -0.98
PDGFC-201ENST00000274071 CDH10Q9Y6N8 788 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 PTPRJQ12913 1337 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 A0A1W2PQL4 384 aaPredicted RBP8.92□□□□□ -0.98
PDGFC-201ENST00000274071 GPR37O15354 613 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 RGS11O94810 467 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 CCNB2O95067 398 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 PRKAR1AP10644 381 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 CXCL3P19876 107 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 HOXA9P31269 272 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 NNMTP40261 264 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 KCNJ5P48544 419 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 MTPNP58546 118 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 PTPN11Q06124 597 aaPredicted RBP8.92□□□□□ -0.98
PDGFC-201ENST00000274071 RBMS2Q15434 407 aaKnown RBP8.92□□□□□ -0.98
PDGFC-201ENST00000274071 KYAT1Q16773 422 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 ZER1Q7Z7L7 766 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 PHYKPLQ8IUZ5 450 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 SLC41A1Q8IVJ1 513 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 SLC34A3Q8N130 599 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 STX19Q8N4C7 294 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 C2CD4CQ8TF44 421 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 POF1BQ8WVV4 589 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 RXFP2Q8WXD0 754 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 BSNDQ8WZ55 320 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 GGHQ92820 318 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 FATE1Q969F0 183 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 DNTTIP1Q9H147 329 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 BRD9Q9H8M2 597 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 SLC28A3Q9HAS3 691 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 FOLH1BQ9HBA9 442 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 ATXN7L1Q9ULK2 861 aaPredicted RBP8.92□□□□□ -0.98
PDGFC-201ENST00000274071 NCKAP1Q9Y2A7 1128 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 DNAJC15Q9Y5T4 150 aa8.92□□□□□ -0.98
PDGFC-201ENST00000274071 SCAMP1O15126 338 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 CCNDBP1O95273 360 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 IL6P05231 212 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 STSP08842 583 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 PDGFRAP16234 1089 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 APEX1P27695 318 aaKnown RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 TRHRP34981 398 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 ZFP36L2P47974 494 aaKnown RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 FNTBP49356 437 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 AGFG1P52594 562 aaKnown RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 PRMT2P55345 433 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 ERVK-25P63136 954 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 DEFA5Q01523 94 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 SOX4Q06945 474 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 RIPPLY1Q0D2K3 151 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 RCAN2Q14206 197 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 LRRC66Q68CR7 880 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 RGMBQ6NW40 437 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 TRMT11Q7Z4G4 463 aaKnown RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 PSTKQ8IV42 348 aaKnown RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 MCATQ8IVS2 390 aaKnown RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 SLC44A2Q8IWA5 706 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 FAM217AQ8IXS0 508 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 PGBD3Q8N328 593 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 GPD1LQ8N335 351 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 KLHL36Q8N4N3 616 aa8.91□□□□□ -0.98
PDGFC-201ENST00000274071 C12orf45Q8N5I9 185 aaPredicted RBP8.91□□□□□ -0.98
PDGFC-201ENST00000274071 EXOSC8Q96B26 276 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms