RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 WASHC1A8K0Z3 465 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 DNAJB2P25686 324 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 C2orf80Q0P641 193 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 RPA4Q13156 261 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 GTF2H2Q13888 395 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 GTF2H2CQ6P1K8 395 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 RGL4Q8IZJ4 473 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 NELL1Q92832 810 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 NTAN1Q96AB6 310 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 COL21A1Q96P44 957 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 PANX1Q96RD7 426 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 MS4A7Q9GZW8 240 aaPredicted RBP12.4□□□□□ -0.42
HERC6-202ENST00000273960 PCDHGB2Q9Y5G2 931 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 V9GYH0 126 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 LAMA2P24043 3122 aaKnown RBP12.4□□□□□ -0.42
HERC6-202ENST00000273960 FABP7O15540 132 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 GPR32O75388 356 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 F2P00734 622 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 HRGP04196 525 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 IL2P60568 153 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 RAB8AP61006 207 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 SPIBQ01892 262 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 DSC3Q14574 896 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 ALFQ53S48 1182 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 SAXO2Q658L1 398 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 COMMD7Q86VX2 200 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 TMEM132CQ8N3T6 1108 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 ASIC4Q96FT7 647 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 CCDC32Q9BV29 185 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 SLC25A51Q9H1U9 297 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 NPAP1Q9NZP6 1156 aa12.4□□□□□ -0.42
HERC6-202ENST00000273960 NDRG2Q9UN36 371 aaKnown RBP12.4□□□□□ -0.42
HERC6-202ENST00000273960 ZNF646O15015 1829 aaPredicted RBP12.4□□□□□ -0.43
HERC6-202ENST00000273960 J3KTA2 159 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 TNFRSF11BO00300 401 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 ULK1O75385 1050 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 ENGP17813 658 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 CD72P21854 359 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 PSAPL1Q6NUJ1 521 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 VN1R5Q7Z5H4 357 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 AADATQ8N5Z0 425 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 DNAJC5GQ8N7S2 189 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 CDKN2AIPNLQ96HQ2 116 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 APOLD1Q96LR9 279 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 ADAM2Q99965 735 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 LRTM1Q9HBL6 345 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 RIMKLBQ9ULI2 386 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 ISM1B1AKI9 464 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 F8W810 466 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 PDPK1O15530 556 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 TPPPO94811 219 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 IGFBP1P08833 259 aaPredicted RBP12.39□□□□□ -0.43
HERC6-202ENST00000273960 AKR1A1P14550 325 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 AKR1D1P51857 326 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 CSTF3Q12996 717 aaKnown RBP12.39□□□□□ -0.43
HERC6-202ENST00000273960 TARDBPQ13148 414 aaKnown RBP eCLIP12.39□□□□□ -0.43
HERC6-202ENST00000273960 IL18Q14116 193 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 TBCEQ15813 527 aaPredicted RBP12.39□□□□□ -0.43
HERC6-202ENST00000273960 SSX1Q16384 188 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 ANKRD54Q6NXT1 300 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 CFAP77Q6ZQR2 320 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 PTCHD4Q6ZW05 846 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 CLECL1Q8IZS7 167 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 PEX13Q92968 403 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 SPATA9Q9BWV2 254 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 SRRQ9GZT4 340 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 CATSPERBQ9H7T0 1116 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 WWOXQ9NZC7 414 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 CCDC59Q9P031 241 aaKnown RBP12.39□□□□□ -0.43
HERC6-202ENST00000273960 CMAHPQ9Y471 501 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 SMIM35A0A1B0GVV1 85 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 GSAPA4D1B5 854 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 VPS26AO75436 327 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 UGT2B17O75795 530 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 NCR1O76036 304 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 RORCP51449 518 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 STC1P52823 247 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 CXCR4P61073 352 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 ARHGEF7Q14155 803 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 GRM7Q14831 915 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 LEXMQ3ZCV2 418 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 SPATS1Q496A3 300 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 LAMTOR1Q6IAA8 161 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 ZNF598Q86UK7 904 aaKnown RBP12.39□□□□□ -0.43
HERC6-202ENST00000273960 ZSWIM9Q86XI8 627 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 FCGR1BQ92637 280 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 NUSAP1Q9BXS6 441 aaKnown RBP12.39□□□□□ -0.43
HERC6-202ENST00000273960 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.39□□□□□ -0.43
HERC6-202ENST00000273960 FAM105AQ9NUU6 356 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 MGAT4AQ9UM21 535 aa12.39□□□□□ -0.43
HERC6-202ENST00000273960 SAMD4AQ9UPU9 718 aaKnown RBP12.39□□□□□ -0.43
HERC6-202ENST00000273960 MYLKQ15746 1914 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 BCKDHAP12694 445 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 ACVRL1P37023 503 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 OR1G1P47890 313 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 TAGLNQ01995 201 aaKnown RBP12.38□□□□□ -0.43
HERC6-202ENST00000273960 ZNF235Q14590 738 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 P2RY14Q15391 338 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 FAM187BQ17R55 369 aa12.38□□□□□ -0.43
HERC6-202ENST00000273960 ANKS3Q6ZW76 656 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms