RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 K7ESM1 405 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 SPINT1O43278 529 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 PCDH7O60245 1069 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 FKBP9O95302 570 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 SEMG1P04279 462 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 ABCB1P08183 1280 aaPredicted RBP12.42□□□□□ -0.42
CPSF6-201ENST00000266679 SRPRAP08240 638 aaKnown RBP12.42□□□□□ -0.42
CPSF6-201ENST00000266679 ITGAMP11215 1152 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 HLA-EP13747 358 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 HOXB6P17509 224 aaKnown RBP12.42□□□□□ -0.42
CPSF6-201ENST00000266679 IRS1P35568 1242 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 DAPP51397 102 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 ISL1P61371 349 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 ST8SIA6P61647 398 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 GRSF1Q12849 480 aaKnown RBP eCLIP12.42□□□□□ -0.42
CPSF6-201ENST00000266679 TOP3AQ13472 1001 aaPredicted RBP12.42□□□□□ -0.42
CPSF6-201ENST00000266679 GAB1Q13480 694 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 RAPSNQ13702 412 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 RFX4Q33E94 735 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 CATSPEREQ5SY80 951 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 CYP4Z1Q86W10 505 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 TRAPPC5Q8IUR0 188 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 NPAS3Q8IXF0 933 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 CFAP206Q8IYR0 622 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 OR4A15Q8NGL6 344 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 ZNF480Q8WV37 535 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 NXPE3Q969Y0 559 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 OTUB2Q96DC9 234 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 ERLEC1Q96DZ1 483 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 DTD2Q96FN9 168 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 TPD52L3Q96J77 140 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 LRRC3BQ96PB8 259 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 MYOCQ99972 504 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 DGCR6LQ9BY27 220 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 OR2AG1Q9H205 316 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 IGFLR1Q9H665 355 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 IL1RAPQ9NPH3 570 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 PAK1IP1Q9NWT1 392 aaPredicted RBP12.42□□□□□ -0.42
CPSF6-201ENST00000266679 CLDND1Q9NY35 253 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 TMEM9Q9P0T7 183 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 FZD4Q9ULV1 537 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 A0A0J9YVX5 310 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 MGAT4DA6NG13 374 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 PTGES3LE9PB15 166 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 LINC01565O15544 149 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 XYLBO75191 536 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 C1orf105O95561 183 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 CISD3P0C7P0 127 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 AQP1P29972 269 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 TIA1P31483 386 aaKnown RBP eCLIP12.42□□□□□ -0.421e-9■■■■■ 34.1
CPSF6-201ENST00000266679 ASMTP46597 345 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 C21orf58P58505 322 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 DLX2Q07687 328 aaPredicted RBP12.42□□□□□ -0.42
CPSF6-201ENST00000266679 MESP2Q0VG99 397 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 SIM2Q14190 667 aaPredicted RBP12.42□□□□□ -0.42
CPSF6-201ENST00000266679 RAET1GQ6H3X3 334 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 MED27Q6P2C8 311 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 SLCO4C1Q6ZQN7 724 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 CBLL1Q75N03 491 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 EIF3MQ7L2H7 374 aaKnown RBP12.42□□□□□ -0.42
CPSF6-201ENST00000266679 ADGRD2Q7Z7M1 963 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 ZBTB46Q86UZ6 589 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 NRSN1Q8IZ57 195 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 SYNPOQ8N3V7 929 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 CHTF18Q8WVB6 975 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 STARD8Q92502 1023 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 EZH1Q92800 747 aaPredicted RBP12.42□□□□□ -0.42
CPSF6-201ENST00000266679 C11orf24Q96F05 449 aaPredicted RBP12.42□□□□□ -0.42
CPSF6-201ENST00000266679 CNDP2Q96KP4 475 aaKnown RBP12.42□□□□□ -0.42
CPSF6-201ENST00000266679 COQ10AQ96MF6 247 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 ASPSCR1Q9BZE9 553 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 CCDC90BQ9GZT6 254 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 SH3BP4Q9P0V3 963 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 KIF17Q9P2E2 1029 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 BAG5Q9UL15 447 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 SNX5Q9Y5X3 404 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 KCNE2Q9Y6J6 123 aa12.42□□□□□ -0.42
CPSF6-201ENST00000266679 NUP210Q8TEM1 1887 aaPredicted RBP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 ANKRD33BA6NCL7 494 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 SAP18O00422 153 aaKnown RBP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 SLC16A6O15403 523 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 XPNPEP2O43895 674 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 SOD1P00441 154 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 NTRK1P04629 796 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 CCNA2P20248 432 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 IDSP22304 550 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 CLK3P49761 638 aaKnown RBP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 PLA2G16P53816 162 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 CASP9P55211 416 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 NFATC3Q12968 1075 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 SLBPQ14493 270 aaKnown RBP eCLIP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 FNDC3BQ53EP0 1204 aaKnown RBP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 ZNF385BQ569K4 471 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 SPIN4Q56A73 249 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 ANGPTL8Q6UXH0 198 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 ZC3H7AQ8IWR0 971 aaKnown RBP12.41□□□□□ -0.42
CPSF6-201ENST00000266679 PGBD3Q8N328 593 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 PIK3C3Q8NEB9 887 aa12.41□□□□□ -0.42
CPSF6-201ENST00000266679 MAL2Q969L2 176 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 95.1 ms