RNA–Protein interactions for RNA: ENST00000265619.6

VAPB-201, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,596 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-201ENST00000265619 ESRP2Q9H6T0 727 aaKnown RBP8.49□□□□□ -1.05
VAPB-201ENST00000265619 GORASP2Q9H8Y8 452 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 B3GAT2Q9NPZ5 323 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 GTF2IRD1Q9UHL9 959 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 SCN1AP35498 2009 aa8.49□□□□□ -1.05
VAPB-201ENST00000265619 TRAV20A0A0B4J274 112 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 MYL12BO14950 172 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 RFPL3O75679 317 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 JCHAINP01591 159 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 G6PDP11413 515 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 ARSBP15848 533 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 MYL12AP19105 171 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 ARL4AP40617 200 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 CSKP41240 450 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 GBX2P52951 348 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 CAV3P56539 151 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 LRRC32Q14392 662 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 MED22Q15528 200 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 PKN3Q6P5Z2 889 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 SHQ1Q6PI26 577 aaKnown RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 KRT77Q7Z794 578 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 CTU1Q7Z7A3 348 aaKnown RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 ZNF467Q7Z7K2 595 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 ZFAND4Q86XD8 727 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 BBS7Q8IWZ6 715 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 ZNF431Q8TF32 576 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 SLC5A11Q8WWX8 675 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 CENPIQ92674 756 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 PTP4A1Q93096 173 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 TMEM184CQ9NVA4 438 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 PRG3Q9Y2Y8 225 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 NCF1BA6NI72 391 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 NCF1CA8MVU1 366 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 CLDN5O00501 218 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 FGF18O76093 207 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 WDR47O94967 919 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 PLATP00750 562 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 NCF1P14598 390 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 HOXA11P31270 313 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 RBP5P82980 135 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 TIAL1Q01085 375 aaKnown RBP eCLIP8.48□□□□□ -1.05
VAPB-201ENST00000265619 P2RY14Q15391 338 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 GRK1Q15835 563 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 KYAT1Q16773 422 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 PROX2Q3B8N5 592 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 GCNT7Q6ZNI0 430 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 ZNF551Q7Z340 670 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 VTCN1Q7Z7D3 282 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 ADGRG3Q86Y34 549 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 DNAJC22Q8N4W6 341 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 SLC37A3Q8NCC5 494 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 IPMKQ8NFU5 416 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 PIP5K1AQ99755 562 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 SP110Q9HB58 689 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 CREBZFQ9NS37 354 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 SLCO1C1Q9NYB5 712 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 RDH8Q9NYR8 311 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 PCOLCE2Q9UKZ9 415 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 CRYL1Q9Y2S2 319 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 TNPO3Q9Y5L0 923 aaKnown RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 GRXCR2A6NFK2 248 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 KHNYNO15037 678 aaKnown RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 PQBP1O60828 265 aaKnown RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 CREG1O75629 220 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 OR5F1O95221 314 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 EPOP01588 193 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 CYP17A1P05093 508 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 CENPAP49450 140 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 HTR6P50406 440 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 DGKEP52429 567 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 ST3GAL4Q11206 333 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 HECTD2Q5U5R9 776 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 LCLAT1Q6UWP7 414 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 TFAP2EQ6VUC0 442 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 ZDHHC21Q8IVQ6 265 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 FAM126BQ8IXS8 530 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 ARRDC4Q8NCT1 418 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 ATP6V1C2Q8NEY4 427 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 GPR152Q8TDT2 470 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 IPCEF1Q8WWN9 437 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 ATOH1Q92858 354 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 FUBP1Q96AE4 644 aaKnown RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 CXorf58Q96LI9 332 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 SLC9A7Q96T83 725 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 NPAS1Q99742 590 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 TINAGL1Q9GZM7 467 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 RANBP3Q9H6Z4 567 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 AGO3Q9H9G7 860 aaKnown RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 DYRK4Q9NR20 520 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 DCAF13Q9NV06 445 aaKnown RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 ING3Q9NXR8 418 aa8.48□□□□□ -1.05
VAPB-201ENST00000265619 KLF2Q9Y5W3 355 aaPredicted RBP8.48□□□□□ -1.05
VAPB-201ENST00000265619 RANBP2P49792 3224 aaKnown RBP8.47□□□□□ -1.05
VAPB-201ENST00000265619 C2orf81A6NN90 581 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 DCLK1O15075 740 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 GPR32O75388 356 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 KATNA1O75449 491 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 FGF4P08620 206 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 CXCL3P19876 107 aa8.47□□□□□ -1.05
VAPB-201ENST00000265619 LMO2P25791 158 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms