RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 SERPINA6P08185 405 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 ANKRD34CP0C6C1 535 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 MPC1LP0DKB6 136 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 PTPN4P29074 926 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 EEF1DP29692 281 aaKnown RBP12.78□□□□□ -0.36
SGCA-201ENST00000262018 GFERP55789 205 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 NCALDP61601 193 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 IL10RAQ13651 578 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 IL11RAQ14626 422 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 KRT72Q14CN4 511 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 TGFBIQ15582 683 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 SH2D4BQ5SQS7 431 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 VWA5B1Q5TIE3 1220 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 NEK10Q6ZWH5 1172 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 RPS27LQ71UM5 84 aaKnown RBP12.78□□□□□ -0.36
SGCA-201ENST00000262018 DET1Q7L5Y6 550 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 PLXDC1Q8IUK5 500 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 AFAP1L2Q8N4X5 818 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 PDPRQ8NCN5 879 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 ZNF483Q8TF39 744 aaPredicted RBP12.78□□□□□ -0.36
SGCA-201ENST00000262018 SH3KBP1Q96B97 665 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 SCARF2Q96GP6 870 aaPredicted RBP12.78□□□□□ -0.36
SGCA-201ENST00000262018 RAB3IPQ96QF0 476 aaPredicted RBP12.78□□□□□ -0.36
SGCA-201ENST00000262018 TBC1D10AQ9BXI6 508 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 SHCBP1LQ9BZQ2 653 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 NMUR2Q9GZQ4 415 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 CD274Q9NZQ7 290 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 ATXN10Q9UBB4 475 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 TMEM98Q9Y2Y6 226 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 CAPN7Q9Y6W3 813 aa12.78□□□□□ -0.36
SGCA-201ENST00000262018 AKAP9Q99996 3911 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 MN1Q10571 1320 aaPredicted RBP12.77□□□□□ -0.37
SGCA-201ENST00000262018 LRRC14BA6NHZ5 514 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 UBFD1O14562 309 aaKnown RBP12.77□□□□□ -0.37
SGCA-201ENST00000262018 SNX2O60749 519 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 UNC5CO95185 931 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 FGF4P08620 206 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 T-ENOLP0DO92 83 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 PRLHRP49683 370 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 EPHA4P54764 986 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 RPS15P62841 145 aaKnown RBP12.77□□□□□ -0.37
SGCA-201ENST00000262018 TMEM115Q12893 351 aaPredicted RBP12.77□□□□□ -0.37
SGCA-201ENST00000262018 GTF2H3Q13889 308 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 SLC9B1Q4ZJI4 515 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 ZNF648Q5T619 568 aaPredicted RBP12.77□□□□□ -0.37
SGCA-201ENST00000262018 FAM199XQ6PEV8 388 aaPredicted RBP12.77□□□□□ -0.37
SGCA-201ENST00000262018 FRA10AC1Q70Z53 315 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 ADGRG6Q86SQ4 1221 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 SYVN1Q86TM6 617 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 RASGEF1AQ8N9B8 481 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 AGR3Q8TD06 166 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 CCDC28BQ9BUN5 200 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 GPR87Q9BY21 358 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 OR2AG1Q9H205 316 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 MRGBPQ9NV56 204 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 ADAMTS6Q9UKP5 1117 aa12.77□□□□□ -0.37
SGCA-201ENST00000262018 ABCA2Q9BZC7 2435 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 TRPC5OSA6NMA1 111 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 GPC4O75487 556 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 CDK14O94921 469 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 S100BP04271 92 aaPredicted RBP12.76□□□□□ -0.37
SGCA-201ENST00000262018 ITGA3P26006 1051 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 AGTR2P50052 363 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 CTSCP53634 463 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 CLCQ05315 142 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 RIPK1Q13546 671 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 PCBP2Q15366 365 aaKnown RBP eCLIP12.76□□□□□ -0.37
SGCA-201ENST00000262018 BCL7AQ4VC05 210 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 CDKL4Q5MAI5 379 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 METTL21CQ5VZV1 264 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 GALNT13Q8IUC8 556 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 DLG3Q92796 817 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 MAELQ96JY0 434 aaKnown RBP12.76□□□□□ -0.37
SGCA-201ENST00000262018 CCDC106Q9BWC9 280 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 AKIRIN1Q9H9L7 192 aaPredicted RBP12.76□□□□□ -0.37
SGCA-201ENST00000262018 TNFRSF12AQ9NP84 129 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 GPR83Q9NYM4 423 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 PTBP2Q9UKA9 531 aaKnown RBP12.76□□□□□ -0.37
SGCA-201ENST00000262018 PCTPQ9UKL6 214 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 CDYLQ9Y232 598 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 OSGIN2Q9Y236 505 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 TRAF6Q9Y4K3 522 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 TNPO3Q9Y5L0 923 aaKnown RBP12.76□□□□□ -0.37
SGCA-201ENST00000262018 COPG1Q9Y678 874 aaKnown RBP12.76□□□□□ -0.37
SGCA-201ENST00000262018 SPG11Q96JI7 2443 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 CSMD2Q7Z408 3487 aa12.76□□□□□ -0.37
SGCA-201ENST00000262018 ANKRD12Q6UB98 2062 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 NCF1BA6NI72 391 aaPredicted RBP12.75□□□□□ -0.37
SGCA-201ENST00000262018 NCF1CA8MVU1 366 aaPredicted RBP12.75□□□□□ -0.37
SGCA-201ENST00000262018 CAPN14A8MX76 684 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 CHUKO15111 745 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 SLC16A5O15375 505 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 SLCO2B1O94956 709 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 TIAF1O95411 115 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 C8GP07360 202 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 ENO2P09104 434 aaPredicted RBP12.75□□□□□ -0.37
SGCA-201ENST00000262018 FGF5P12034 268 aa12.75□□□□□ -0.37
SGCA-201ENST00000262018 NCF1P14598 390 aaPredicted RBP12.75□□□□□ -0.37
SGCA-201ENST00000262018 ZNF8P17098 575 aaPredicted RBP12.75□□□□□ -0.37
SGCA-201ENST00000262018 CDH13P55290 713 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms