RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 RLIMQ9NVW2 624 aa15.62■□□□□ 0.09
SNCAIP-202ENST00000261368 EXOC3L2Q2M3D2 409 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 CAPN13Q6MZZ7 669 aaPredicted RBP15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 TPRG1Q6ZUI0 275 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 Q6ZVL8 140 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 USP43Q70EL4 1123 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 TMCO2Q7Z6W1 182 aaPredicted RBP15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 ZSWIM9Q86XI8 627 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 BBS7Q8IWZ6 715 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 FAM217AQ8IXS0 508 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 VMP1Q96GC9 406 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 FOPNLQ96NB1 174 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 CASD1Q96PB1 797 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 SUV39H2Q9H5I1 410 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 J3KTA2 159 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 SOX14O95416 240 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 CD6P30203 668 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 DESI1Q6ICB0 168 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 SERPINA11Q86U17 422 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 NPAS4Q8IUM7 802 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 SLC34A3Q8N130 599 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 ELMOD1Q8N336 334 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 ITPKCQ96DU7 683 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 PKP4Q99569 1192 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 KLF16Q9BXK1 252 aaPredicted RBP15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 NDEL1Q9GZM8 345 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 EHD1Q9H4M9 534 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 PCDHB11Q9Y5F2 797 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 EFCAB10A6NFE3 127 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 UPK1BO75841 260 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 KRT75O95678 551 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 ATP1B2P14415 290 aaPredicted RBP15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 HOXA9P31269 272 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 CCBE1Q6UXH8 406 aaPredicted RBP15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 NPAS3Q8IXF0 933 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 MINDY2Q8NBR6 621 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 ASZ1Q8WWH4 475 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 CENPOQ9BU64 300 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 NDRG4Q9ULP0 352 aaKnown RBP15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 MICAL3Q7RTP6 2002 aa15.61■□□□□ 0.09
SNCAIP-202ENST00000261368 ADAMDEC1O15204 470 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 FZD6O60353 706 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 C6orf47O95873 294 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 CKMT1AP12532 417 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 SELPP16109 830 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 CDC42P60953 191 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 RPS13P62277 151 aaKnown RBP15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 C2orf80Q0P641 193 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 CBLL1Q75N03 491 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 TCAIMQ8N3R3 496 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 ZNF366Q8N895 744 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 VANGL1Q8TAA9 524 aaPredicted RBP15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 SLC35A5Q9BS91 424 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 SLIRPQ9GZT3 109 aaKnown RBP15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 MMP27Q9H306 513 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 OR51B5Q9H339 312 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 MIEF1Q9NQG6 463 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 TMED5Q9Y3A6 229 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 TRBV5-3A0A0A0MS03 114 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 A6NL46 340 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 GABRR3A8MPY1 467 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 WBP4O75554 376 aaKnown RBP15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 CATP04040 527 aaKnown RBP15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 HMGA1P17096 107 aaKnown RBP15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 TGM1P22735 817 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 SPDYE7PQ495Y7 208 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 IFI44LQ53G44 452 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 AGAP7PQ5VUJ5 663 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 C11orf96Q7Z7L8 435 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 ATL1Q8WXF7 558 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 FAM120CQ9NX05 1096 aaKnown RBP15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 OR2A25A4D2G3 310 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 RFPL2O75678 378 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 PTHP01270 115 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 SERPIND1P05546 499 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 FEN1P39748 380 aaKnown RBP15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 MAPK8P45983 427 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 MC1RQ01726 317 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 TRIM71Q2Q1W2 868 aaKnown RBP15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 AGTRAPQ6RW13 159 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 DPY19L3Q6ZPD9 716 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 PTOV1Q86YD1 416 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 LILRA3Q8N6C8 439 aaPredicted RBP15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 ZNF461Q8TAF7 563 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 TESCQ96BS2 214 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 SLC12A9Q9BXP2 914 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 MAN2B2Q9Y2E5 1009 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 PCDHGA6Q9Y5G7 932 aa15.6■□□□□ 0.09
SNCAIP-202ENST00000261368 GFRA2O00451 464 aa15.59■□□□□ 0.09
SNCAIP-202ENST00000261368 TPST2O60704 377 aa15.59■□□□□ 0.09
SNCAIP-202ENST00000261368 SLC19A1P41440 591 aa15.59■□□□□ 0.09
SNCAIP-202ENST00000261368 RUNX1T1Q06455 604 aa15.59■□□□□ 0.09
SNCAIP-202ENST00000261368 CCDC71Q8IV32 467 aaPredicted RBP15.59■□□□□ 0.09
SNCAIP-202ENST00000261368 C2orf15Q8WU43 125 aaKnown RBP15.59■□□□□ 0.09
SNCAIP-202ENST00000261368 GGHQ92820 318 aa15.59■□□□□ 0.09
SNCAIP-202ENST00000261368 CCM2Q9BSQ5 444 aa15.59■□□□□ 0.09
SNCAIP-202ENST00000261368 DOHHQ9BU89 302 aa15.59■□□□□ 0.09
SNCAIP-202ENST00000261368 MRPL9Q9BYD2 267 aaKnown RBP15.59■□□□□ 0.09
SNCAIP-202ENST00000261368 FAM83DQ9H4H8 585 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms