RNA–Protein interactions for RNA: ENST00000261366.9

LMNB1-201, Transcript of lamin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMNB1, Length 2,878 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-201ENST00000261366 ARHGAP33O14559 1287 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 ACSL4O60488 711 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 GPX5O75715 221 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 RHOAP61586 193 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 KCNJ10P78508 379 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 DSC3Q14574 896 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 CDK10Q15131 360 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 EXOC3L2Q2M3D2 409 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 PTCHD3Q3KNS1 767 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 SERPINA11Q86U17 422 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 LGI4Q8N135 537 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 C7orf34Q96L11 122 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 TMEM121BQ9BXQ6 578 aaPredicted RBP15.35■□□□□ 0.05
LMNB1-201ENST00000261366 IRF2BPLQ9H1B7 796 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 TRPV5Q9NQA5 729 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 ABCB8Q9NUT2 735 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 AP3M1Q9Y2T2 418 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 MEIOCA2RUB1 952 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 KDELR3O43731 214 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 PCDH7O60245 1069 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 AOC2O75106 756 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 CPNE3O75131 537 aaKnown RBP15.35■□□□□ 0.05
LMNB1-201ENST00000261366 ANXA5P08758 320 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 RPS19P39019 145 aaKnown RBP15.35■□□□□ 0.05
LMNB1-201ENST00000261366 RFX2P48378 723 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 ARF5P84085 180 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 STARD3Q14849 445 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 CCDC190Q86UF4 302 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 NAGSQ8N159 534 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 GPR156Q8NFN8 814 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 NTMT1Q9BV86 223 aa15.35■□□□□ 0.05
LMNB1-201ENST00000261366 A0A0U1RQF3 1178 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 A0A1W2PQ09 198 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 F11P03951 625 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 GBAP04062 536 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 IL1RNP18510 177 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 CSTF3Q12996 717 aaKnown RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 KRR1Q13601 381 aaKnown RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 CHRNA6Q15825 494 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 NFE2Q16621 373 aaPredicted RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 ALG1LQ6GMV1 187 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 RBFAQ8N0V3 343 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 TP53I13Q8NBR0 393 aaPredicted RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 OR7G1Q8NGA0 311 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 TMEM203Q969S6 136 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 COQ8BQ96D53 544 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 ASPNQ9BXN1 380 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 SMURF1Q9HCE7 757 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 IL26Q9NPH9 171 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 RPRD1BQ9NQG5 326 aaKnown RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 CCDC59Q9P031 241 aaKnown RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 SH3BP4Q9P0V3 963 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 PCDHB8Q9UN66 801 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 PCDHB1Q9Y5F3 818 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 PCDHGB3Q9Y5G1 929 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 CFAP20Q9Y6A4 193 aaKnown RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 NLRC5Q86WI3 1866 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 NT5C1B-RDH14C9J2C7 533 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 TNFRSF10AO00220 468 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 PRAMEF4O60810 478 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 HOXB9P17482 250 aaPredicted RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 NFATC2Q13469 925 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 BOP1Q14137 746 aaKnown RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 LRRC73Q5JTD7 316 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 PRAMEF9Q5VWM5 478 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 PAMR1Q6UXH9 720 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 BCDIN3DQ7Z5W3 292 aaKnown RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 CARNMT1Q8N4J0 409 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 ZIC5Q96T25 663 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 TCF25Q9BQ70 676 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 NXF2Q9GZY0 626 aaKnown RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 C11orf16Q9NQ32 467 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 HCSTQ9UBK5 93 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 CLEC2DQ9UHP7 191 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 Q9Y3F1 56 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 PCDH17O14917 1159 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 DUSP11O75319 330 aaKnown RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 SLITRK5O94991 958 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 KLKB1P03952 638 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 PRPS2P11908 318 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 HLA-EP13747 358 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 MAGEA11P43364 429 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 GPR50Q13585 617 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 FAM180BQ6P0A1 224 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 KLHL17Q6TDP4 642 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 UBE2R2Q712K3 238 aaPredicted RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 ARMCX6Q7L4S7 300 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 TSEN54Q7Z6J9 526 aaKnown RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 NLRP8Q86W28 1048 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 BBS7Q8IWZ6 715 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 C8orf48Q96LL4 319 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 NDUFAF4Q9P032 175 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 MBD1Q9UIS9 605 aaPredicted RBP15.34■□□□□ 0.05
LMNB1-201ENST00000261366 ACSL6Q9UKU0 697 aa15.34■□□□□ 0.05
LMNB1-201ENST00000261366 IFI30P13284 250 aa15.33■□□□□ 0.04
LMNB1-201ENST00000261366 HOXC8P31273 242 aa15.33■□□□□ 0.04
LMNB1-201ENST00000261366 GALK2Q01415 458 aa15.33■□□□□ 0.04
LMNB1-201ENST00000261366 E2F2Q14209 437 aa15.33■□□□□ 0.04
LMNB1-201ENST00000261366 SSX1Q16384 188 aa15.33■□□□□ 0.04
LMNB1-201ENST00000261366 HKDC1Q2TB90 917 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms