RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 BTBD3Q9Y2F9 522 aa21.44■■□□□ 1.02
SIX3-201ENST00000260653 PTX3P26022 381 aaPredicted RBP21.44■■□□□ 1.02
SIX3-201ENST00000260653 EEFSECP57772 596 aaKnown RBP21.44■■□□□ 1.02
SIX3-201ENST00000260653 AMIGO1Q86WK6 493 aa21.44■■□□□ 1.02
SIX3-201ENST00000260653 GPBAR1Q8TDU6 330 aa21.44■■□□□ 1.02
SIX3-201ENST00000260653 SORBS1Q9BX66 1292 aaKnown RBP21.44■■□□□ 1.02
SIX3-201ENST00000260653 PAIP1Q9H074 479 aaKnown RBP21.44■■□□□ 1.02
SIX3-201ENST00000260653 IKZF5Q9H5V7 419 aa21.44■■□□□ 1.02
SIX3-201ENST00000260653 MRPS30Q9NP92 439 aaKnown RBP21.44■■□□□ 1.02
SIX3-201ENST00000260653 ABCA7Q8IZY2 2146 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 SCAMP2O15127 329 aaKnown RBP21.43■■□□□ 1.02
SIX3-201ENST00000260653 OR1F1O43749 312 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 LCMT2O60294 686 aaKnown RBP21.43■■□□□ 1.02
SIX3-201ENST00000260653 KDM1AO60341 852 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 NDUFS2O75306 463 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 NUDT1P36639 197 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 CDKN2CP42773 168 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 ASMTP46597 345 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 C21orf58P58505 322 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 ZNF763Q0D2J5 394 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 BNIP2Q12982 314 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 DPY19L1Q2PZI1 675 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 SPATS1Q496A3 300 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 PJA1Q8NG27 643 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 OR2L3Q8NG85 312 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 OR8J3Q8NGG0 315 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 FAM210AQ96ND0 272 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 CHRDQ9H2X0 955 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 RMND5AQ9H871 391 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 SIRT5Q9NXA8 310 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 MAN2B2Q9Y2E5 1009 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 C8BP07358 591 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 SHMT2P34897 504 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 VHLP40337 213 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 PRPF38BQ5VTL8 546 aaKnown RBP21.43■■□□□ 1.02
SIX3-201ENST00000260653 SFTPA2Q8IWL1 248 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 SPEM1Q8N4L4 309 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 KLHDC7BQ96G42 594 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 ITCHQ96J02 903 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 KCNH6Q9H252 994 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 TAAR2Q9P1P5 351 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 PCDHB14Q9Y5E9 798 aa21.43■■□□□ 1.02
SIX3-201ENST00000260653 TRBV5-3A0A0A0MS03 114 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 ARPC2O15144 300 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 GSNP06396 782 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 KLK1P06870 262 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 CHRM5P08912 532 aaPredicted RBP21.42■■□□□ 1.02
SIX3-201ENST00000260653 LAMP1P11279 417 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 WNT3P56703 355 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 SRSF11Q05519 484 aaKnown RBP21.42■■□□□ 1.02
SIX3-201ENST00000260653 SWT1Q5T5J6 900 aaKnown RBP21.42■■□□□ 1.02
SIX3-201ENST00000260653 F2RL3Q96RI0 385 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 MS4A8Q9BY19 250 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 OR6C2Q9NZP2 312 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 ADGRE2Q9UHX3 823 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 C15orf41Q9Y2V0 281 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 GABRR3A8MPY1 467 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 AXIN1O15169 862 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 KLHL18O94889 574 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 PIM1P11309 404 aaPredicted RBP21.42■■□□□ 1.02
SIX3-201ENST00000260653 HOXB3P14651 431 aaPredicted RBP21.42■■□□□ 1.02
SIX3-201ENST00000260653 PTPN6P29350 595 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 GRIA3P42263 894 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 KHDRBS2Q5VWX1 349 aaKnown RBP21.42■■□□□ 1.02
SIX3-201ENST00000260653 ZFP1Q6P2D0 407 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 IYDQ6PHW0 289 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 SLC9B2Q86UD5 537 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 PUM2Q8TB72 1066 aaKnown RBP eCLIP21.42■■□□□ 1.02
SIX3-201ENST00000260653 MIEF2Q96C03 454 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 AURKBQ96GD4 344 aaPredicted RBP21.42■■□□□ 1.02
SIX3-201ENST00000260653 LRGUKQ96M69 825 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 NT5DC2Q9H857 520 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 EXO1Q9UQ84 846 aaKnown RBP21.42■■□□□ 1.02
SIX3-201ENST00000260653 KLHL20Q9Y2M5 609 aa21.42■■□□□ 1.02
SIX3-201ENST00000260653 A0A096LPI6 279 aa21.41■■□□□ 1.02
SIX3-201ENST00000260653 TCRBV3S1A0A5B6 114 aa21.41■■□□□ 1.02
SIX3-201ENST00000260653 PLPP1O14494 284 aa21.41■■□□□ 1.02
SIX3-201ENST00000260653 STAMBPO95630 424 aa21.41■■□□□ 1.02
SIX3-201ENST00000260653 RHDQ02161 417 aa21.41■■□□□ 1.02
SIX3-201ENST00000260653 PRRT3Q5FWE3 981 aa21.41■■□□□ 1.02
SIX3-201ENST00000260653 LRIF1Q5T3J3 769 aa21.41■■□□□ 1.02
SIX3-201ENST00000260653 OR8J2Q8NGG1 315 aa21.41■■□□□ 1.02
SIX3-201ENST00000260653 DPH7Q9BTV6 452 aa21.41■■□□□ 1.02
SIX3-201ENST00000260653 GSDMCQ9BYG8 508 aa21.41■■□□□ 1.02
SIX3-201ENST00000260653 PITHD1Q9GZP4 211 aaPredicted RBP21.41■■□□□ 1.02
SIX3-201ENST00000260653 SRMSQ9H3Y6 488 aa21.41■■□□□ 1.02
SIX3-201ENST00000260653 ACTR3BQ9P1U1 418 aa21.41■■□□□ 1.02
SIX3-201ENST00000260653 METTL12A8MUP2 240 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 ISM1B1AKI9 464 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 BTN3A3O00478 584 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 YY2O15391 372 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 SCN2BO60939 215 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 ERN1O75460 977 aaKnown RBP21.4■■□□□ 1.02
SIX3-201ENST00000260653 NCK1P16333 377 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 HOXB9P17482 250 aaPredicted RBP21.4■■□□□ 1.02
SIX3-201ENST00000260653 MAOBP27338 520 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 OR4D2P58180 307 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 DEPDC1Q5TB30 811 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 PARGQ86W56 976 aa21.4■■□□□ 1.02
SIX3-201ENST00000260653 PTRH1Q86Y79 214 aaKnown RBP21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms