RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ISXQ2M1V0 245 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 ALYREFQ86V81 257 aaKnown RBP15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 KIRREL3Q8IZU9 778 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 CHCHD4Q8N4Q1 142 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 TTLQ8NG68 377 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 CREB3L4Q8TEY5 395 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 THAP11Q96EK4 314 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 CHMP6Q96FZ7 201 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 RTKNQ9BST9 563 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 SIDT1Q9NXL6 827 aaKnown RBP15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 PLCL2Q9UPR0 1127 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 PIEZO1Q92508 2521 aa15.1■□□□□ 0.01
CCDC90B-201ENST00000260054 PIP5K1BO14986 540 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 P2RX6O15547 441 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 MAP3K7O43318 606 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 CSO75390 466 aaKnown RBP15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 CHEK2O96017 543 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 PIK3CBP42338 1070 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 VSX2P58304 361 aaPredicted RBP15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 TMTC4Q5T4D3 741 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 CGB2Q6NT52 195 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 MAVSQ7Z434 540 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 WDR75Q8IWA0 830 aaKnown RBP15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 SLC13A3Q8WWT9 602 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 TM4SF19Q96DZ7 209 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 DMRT3Q9NQL9 472 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 OCIAD1Q9NX40 245 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 CLCA2Q9UQC9 943 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 DCDC2BA2VCK2 349 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 FOXE1O00358 373 aaPredicted RBP15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 ZNF195O14628 629 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 HDAC3O15379 428 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 NDUFS4O43181 175 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 HYAL3O43820 417 aaPredicted RBP15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 ETHE1O95571 254 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 EIF2S1P05198 315 aaKnown RBP15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 SERPIND1P05546 499 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 MSL3P1P0C860 447 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 GSTM2P28161 218 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 CSTF2P33240 577 aaKnown RBP eCLIP15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 RPS13P62277 151 aaKnown RBP15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 BTKQ06187 659 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 HYAL2Q12891 473 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 ASPGQ86U10 573 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 AFAP1L2Q8N4X5 818 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 AGBL5Q8NDL9 886 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 TRPV3Q8NET8 790 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 CCT6BQ92526 530 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 RERGQ96A58 199 aaPredicted RBP15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 FAM122AQ96E09 287 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 THOC1Q96FV9 657 aaKnown RBP15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 SEC16BQ96JE7 1060 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 FAR2Q96K12 515 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 PPP1R36Q96LQ0 422 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 C3orf30Q96M34 536 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 ZNF285Q96NJ3 590 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 NUF2Q9BZD4 464 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 ACPTQ9BZG2 426 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 FGF21Q9NSA1 209 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 STARD5Q9NSY2 213 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 ADGRE2Q9UHX3 823 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 USH1CQ9Y6N9 552 aa15.09■□□□□ 0.01
CCDC90B-201ENST00000260054 GMNCA6NCL1 334 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 TMEM150CB9EJG8 249 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 SLCO1B7G3V0H7 640 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 H3BMH7 237 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 SRPX2O60687 465 aaPredicted RBP15.08■□□□□ 0
CCDC90B-201ENST00000260054 SHOX2O60902 331 aaPredicted RBP15.08■□□□□ 0
CCDC90B-201ENST00000260054 SH3BGRLO75368 114 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 CLEC3AO75596 197 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 TGFB1P01137 390 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 LINC00032P0C843 101 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 SERPINB1P30740 379 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 PLA2G5P39877 138 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 HMGCS1Q01581 520 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 ZNF33BQ06732 778 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 TUBB3Q13509 450 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 COL9A2Q14055 689 aaPredicted RBP15.08■□□□□ 0
CCDC90B-201ENST00000260054 HKDC1Q2TB90 917 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 TUBB8Q3ZCM7 444 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 C10orf62Q5T681 223 aaPredicted RBP15.08■□□□□ 0
CCDC90B-201ENST00000260054 VWA5B1Q5TIE3 1220 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 RNF165Q6ZSG1 346 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 DGLUCYQ7Z3D6 616 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 TRIM46Q7Z4K8 759 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 DDIASQ8IXT1 998 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 OR2T11Q8NH01 316 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 N4BP2L2Q92802 583 aaPredicted RBP15.08■□□□□ 0
CCDC90B-201ENST00000260054 ZNF501Q96CX3 271 aaPredicted RBP15.08■□□□□ 0
CCDC90B-201ENST00000260054 C19orf60Q96EN9 201 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 DEPDC7Q96QD5 511 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 MS4A8Q9BY19 250 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 AICDAQ9GZX7 198 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 PRM3Q9NNZ6 103 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 DLL3Q9NYJ7 618 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 VTI1BQ9UEU0 232 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 CCL27Q9Y4X3 112 aa15.08■□□□□ 0
CCDC90B-201ENST00000260054 SERTM1A2A2V5 107 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 EFCAB7A8K855 629 aa15.07■□□□□ 0
CCDC90B-201ENST00000260054 TGDSO95455 350 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms